Repository details

Emage

Name of repository
Emage
Additional name(s)
  • e-Mouse Atlas of Gene Expression
Repository URL
https://www.emouseatlas.org/emage/
Subject(s)
Description
<<<!!!<<<This Mouse Atlas resource has been unfunded for 5 years and maintained in "as-is" state by the Human Genetics Unit.>>>!!!>>> EMAGE (e-Mouse Atlas of Gene Expression) is an online biological database of gene expression data in the developing mouse (Mus musculus) embryo. The data held in EMAGE is spatially annotated to a framework of 3D mouse embryo models produced by EMAP (e-Mouse Atlas Project). These spatial annotations allow users to query EMAGE by spatial pattern as well as by gene name, anatomy term or Gene Ontology (GO) term. EMAGE is a freely available web-based resource funded by the Medical Research Council (UK) and based at the MRC Human Genetics Unit in the Institute of Genetics and Molecular Medicine, Edinburgh, UK.
Contact(s)
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
Repository size
17.554 Genes/Proteins; 32.679 Assays; 22 Stages; 429254 Images
Repository type(s)
  • disciplinary
Mission statement for designated community
https://www.emouseatlas.org/emage/about/mission_statement.php
Research data repository language(s)
  • English
Data and/or service provider
  • dataProvider

Institutions (5)

Institution
EMAP project
Additional name(s)
  • e-Mouse Atlas Project
Institution
Country
United Kingdom
Type(s) of responsibility
  • general
Type of institution
non-profit
Institution
European Union
Additional name(s)
  • EU
Institution
Country
European Union
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution
Medical Research Council
Additional name(s)
  • MRC
Institution
Country
United Kingdom
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution
National Institutes of Health, National Institute of Diabetes and Digestive and Kidney Diseases
Additional name(s)
  • NIDDK
Institution
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution
University of Edinburgh, Institute of Genetics and Cancer, MRC Human Genetics Unit
Institution
Country
United Kingdom
Type(s) of responsibility
  • general
  • technical
Type of institution
non-profit

Policies (1)

Policy Name
MRC Policy

Database access

Type of access to research data repository
open

Database licenses (1)

Database License
CC

Data access (2)

Type of access to data
open
Type of access to data
closed

Data licenses (2)

DataLicense
CC
DataLicense
Copyrights

Data upload (1)

Type of data upload
restricted
Data upload restriction type(s)
  • feeRequired

Data upload license (1)

Data upload license name
Data Submission
Persistent identifier system(s)
  • DOI
Name of the repository software
  • other
Versioning
yes
Data citation guideline
https://www.emouseatlas.org/emage/info/citing.php
Enhanced Publication
yes
Quality management
yes

Application programming interfaces (2)

Type
REST
Url
http://www.emouseatlas.org/emage/search/webservice.php
Type
other
Url
http://www.emouseatlas.org/emage/search/all_direct_access.php

Remarks

Remarks
Emage is covered by Thomson Reuters Data Citation Index. The database consists of 2 parts: The mouse anatomy ontology atlas database and The emage mouse spatial gene expression database.
Entry date
2013-12-09
Last update
2024-12-13
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Cite this re3data.org record:

re3data.org: Emage; editing status 2024-12-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3860B last accessed: 2025-04-25