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Found 122 result(s)

C. Elegans Gene Expression

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!!! <<< Genome data generated by BC Genome Sciences Centre is no longer available through this site as it is regularly deposited into controlled data repositories such as the European Genome Phenome Archive (EGA); ICGC (International Cancer Genome Consortium) and the Genome Data Commons (GDC) <<< !!! Using serial analysis of gene expression (SAGE) and microarrays, we are examining total mRNA populations in all developmental stages, both in whole worms and in specific cells and tissues. In addition, we are building promoter::GFP constructs to monitor gene expression in transgenic worms, focusing on C. elegans genes that have human orthologues. Also available are web-based PCR primer design tools, and access to information about our C. elegans Fosmid library.

Canadian Opinion Research Archive

CORA

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The Canadian Opinion Research Archive at Queen's University makes available commercial and independent surveys to the academic, research and journalistic communities. Founded in 1992, CORA contains hundreds of surveys including thousands of discrete items collected by major commercial Canadian firms dating back to the 1970s. CORA is continually adding new surveys and is always soliciting new data from commercial research firms, independent think tanks, research institutes, NGOs, and academic researchers. This website also includes readily accessible results from these surveys, tracking Canadian opinion over time on frequently asked survey questions, as well as tabular results from recent Canadian surveys, and more general information on polling. This material is made available as a public service by CORA and its partners.

Bedford Institute of Oceanography - Oceanographic Databases

Institut océanographique de Bedford - Bases de données océanographiques

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Databases maintained by Ocean Sciences at the Bedford Institute of Oceanography, including temperature-salinity profiles for the NW Atlantic, sea-surface temperature and chlorophyll from satellite, monthly statistics of ocean currents and other moored instruments, and daily temperature observations from coastal thermographs.

Protist EST Program Database

PEP Database

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<<<!!!<<< The PEP database (TBestDB)--Defunct as of 2017-04 >>>!!!>>> https://megasun.bch.umontreal.ca/pepdb/pepdb.html

Autism Chromosome Rearrangement Database

ACRD

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The Autism Chromosome Rearrangement Database is a collection of hand curated breakpoints and other genomic features, related to autism, taken from publicly available literature: databases and unpublished data. The database is continuously updated with information from in-house experimental data as well as data from published research studies.

Exposome-Explorer

Exposome-Explorer database

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Exposome-Explorer is the first database dedicated to biomarkers of exposure to environmental risk factors for diseases. It contains detailed information on the nature of biomarkers, populations and subjects where measured, samples analyzed, methods used for biomarker analyses, concentrations in biospecimens, correlations with external exposure measurements, and biological reproducibility over time.

Marine Environmental Data Section

MEDS

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As the national oceanographic data centre for Canada, MEDS maintains centralized repositories of some oceanographic data types collected in Canada, and coordinates data exchanges between DFO and recognized intergovernmental organizations, as well as acts as a central point for oceanographic data requests. Real-time, near real-time (for operational oceanography) or historical data are made available as appropriate.

Comprehensive Antibiotic Resistance Database

CARD

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A bioinformatic database of antimicrobial resistance genes, their products and associated phenotypes.

Loyalist Migrations

Loyalist Migrations Project

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Loyalist Migrations is a partnership between the United Empire Loyalist Association of Canada (UELAC), Huron University College’s Community History Centre, and Western Libraries’ Map and Data Centre. Our researchers use the genealogical records of the UELAC as well as other archival sources to reconstruct the migrations of thousands of exiles, refugees, economic migrants, settlers, and soldiers from all walks of life who fled the American Revolution. Not all migrants called themselves Loyalists and it is not the intention of this project to ascribe political motivations for their journeys. The migrations included a diverse array of settlers, Indigenous people, and African Americans who embarked on their journeys, willingly or forced, in search of safety and security in lands claimed by the British Empire.

Open Data Areas Alberta

ODAA

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Datasets from six key areas across Alberta is available for no cost. These include earth observation, remote sensing, geospatial data, environmental data, and social and economic datasets from private industry and government

NWT Discovery Portal

Northwest Territories Discovery Portal

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The NWT Discovery Portal is the most comprehensive online source for environmental monitoring knowledge in the Northwest Territories. It is administered by the NWT Cumulative Impact Monitoring Program. The Portal is a search tool that allows users to access data, metadata and reports. It is also a share tool that allows users to contribute by uploading research and monitoring information.

National Earthquake DataBase

Base Nationale de Données Sismologiques

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The National Earthquake Database (NEDB) comprises a number of separate databases that together act as the national repository for all raw seismograph data, measurements, and derived parameters arising from the Canadian National Seismograph Network (CNSN), the Yellowknife Seismological Array (YKA), previous regional telemetered networks in eastern and western Canada (ECTN, WCTN), local telemetered networks (CLTN, SLTN), the Regional Analogue Network, and the former Standard Seismograph Network (CSN). It supports the efforts of Earthquakes Canada in Canadian seismicity monitoring, global seismic monitoring, verification of the Comprehensive nuclear Test Ban Treaty, and international data exchange. It also supports the Nuclear Explosion Monitoring project.

Atlantic Canada Conservation Data Centre

AC CDC

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The Atlantic Canada Conservation Data Centre (ACCDC) maintains comprehensive lists of plant and animal species. The Atlantic CDC has geo-located records of species occurrences and records of extremely rare to uncommon species in the Atlantic region, including New Brunswick, Nova Scotia, Prince Edward Island, Newfoundland, and Labrador. The Atlantic CDC also maintains biological and other types of data in a variety of linked databases.

Canada's Michael Smith Genome Sciences Centre

GSC

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We are a leading international centre for genomics and bioinformatics research. Our mandate is to advance knowledge about cancer and other diseases, to improve human health through disease prevention, diagnosis and therapeutic approaches, and to realize the social and economic benefits of genomics research.

Open Data Commons for Spinal Cord Injury

ODC-SCI

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A community platform to Share Data, Publish Data with a DOI, and get Citations. Advancing Spinal Cord Injury research through sharing of data from basic and clinical research.

Signature Bank

Banque Signature

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One of the world’s largest banks of biological, psychosocial and clinical data on people suffering from mental health problems. The Signature center systematically collects biological, psychosocial and clinical indicators from patients admitted to the psychiatric emergency and at four points throughout their journey in the hospital: upon arrival to the emergency room (state of crisis), at the end of their hospital stay, as well as at the beginning and the end of outpatient treatment. For all hospital clients who agree to participate, blood specimens are collected for the purpose of measuring metabolic, genetic, toxic and infectious biomarkers, while saliva samples are collected to measure sex hormones and hair samples are collected to measure stress hormones. Questionnaire has been selected to cover important dimensional aspects of mental illness such as Behaviour and Cognition (Psychosis, Depression, Anxiety, Impulsiveness, Aggression, Suicide, Addiction, Sleep),Socio-demographic Profile (Spiritual beliefs, Social functioning, Childhood experiences, Demographic, Family background) and Medical Data (Medication, Diagnosis, Long-term health, RAMQ data). On 2016, May there are more than 1150 participants and 400 for the longitudinal Follow-Up

IMEx

The International Molecular Exchange Consortium

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The IMEx consortium is an international collaboration between a group of major public interaction data providers who have agreed to share curation effort and develop and work to a single set of curation rules when capturing data from both directly deposited interaction data or from publications in peer-reviewed journals, capture full details of an interaction in a “deep” curation model, perform a complete curation of all protein-protein interactions experimentally demonstrated within a publication, make these interaction available in a single search interface on a common website, provide the data in standards compliant download formats, make all IMEx records freely accessible under the Creative Commons Attribution License

Alberta Food Composition Database

AFCDB

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The Alberta Food Composition Database (AFCDB) is the first comprehensive resource on food constituents, chemistry and biology dedicated to major Alberta-grown produce. It provides information on both macronutrients and micronutrients, including many of the constituents that give foods their flavor, color, taste, texture and aroma. Users can view the contents of the AFCDB from the “FoodView” (listing foods by their chemical composition) or the “ChemView” (listing chemicals by their food sources).

Reactome

a curated pathway database

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Reactome is a manually curated, peer-reviewed pathway database, annotated by expert biologists and cross-referenced to bioinformatics databases. Its aim is to share information in the visual representations of biological pathways in a computationally accessible format. Pathway annotations are authored by expert biologists, in collaboration with Reactome editorial staff and cross-referenced to many bioinformatics databases. These include NCBI Gene, Ensembl and UniProt databases, the UCSC and HapMap Genome Browsers, the KEGG Compound and ChEBI small molecule databases, PubMed, and Gene Ontology.

Canadian Research Data Centre Network

CRDCN

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Research Data Centres offer a secure access to detailed microdata from Statistics Canada's surveys, and to Canadian censuses' data, as well as to an increasing number of administrative data sets. The search engine was designed to help you find out more easily which dataset among all the surveys available in the RDCs best suits your research needs.

INDEPTH Data Repository

International Network for the Demographic Evaluation of Populations and Their Health Data Repository

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INDEPTH is a global network of research centres that conduct longitudinal health and demographic evaluation of populations in low- and middle-income countries (LMICs). INDEPTH aims to strengthen global capacity for Health and Demographic Surveillance Systems (HDSSs), and to mount multi-site research to guide health priorities and policies in LMICs, based on up-to-date scientific evidence. The data collected by the INDEPTH Network members constitute a valuable resource of population and health data for LMIC countries. This repository aims to make well documented anonymised longitudinal microdata from these Centres available to data users.

PRISM Dataverse

University of Calgary Data Repository

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PRISM Dataverse is the institutional data repository of the University of Calgary, which has its purpose in digital archiving and sharing of research data from researchers. PRISM Dataverse is a data repository hosted through Borealis, a service of the Ontario Council of University Libraries and supported by University of Calgary's Libraries and Cultural Resources. PRISM Dataverse enables scholars to easily deposit data, create data-specific metadata for searchability and publish their datasets.

Canadian Astronomy Data Centre

Centre canadien de données astronomiques

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The Canadian Astronomy Data Centre (CADC) was established in 1986 by the National Research Council of Canada (NRC), through a grant provided by the Canadian Space Agency (CSA). Over the past 30 years the CADC has evolved from an archiving centre---hosting data from Hubble Space Telescope, Canada-France-Hawaii Telescope, the Gemini observatories, and the James Clerk Maxwell Telescope---into a Science Platform for data-intensive astronomy. The CADC, in partnership with Shared Services Canada, Compute Canada, CANARIE and the university community (funded through the Canadian Foundation for Innovation), offers cloud computing, user-managed storage, group management, and data publication services, in addition to its ongoing mission to provide permanent storage for major data collections. Located at NRC Herzberg Astronomy and Astrophysics Research Centre in Victoria, BC, the CADC staff consists of professional astronomers, software developers, and operations staff who work with the community to develop and deliver leading-edge services to advance Canadian research. The CADC plays a leading role in international efforts to improve the scientific/technical landscape that supports data intensive science. This includes leadership roles in the International Virtual Observatory Alliance and participation in organizations like the Research Data Alliance, CODATA, and the World Data Systems. CADC also contributes significantly to future Canadian projects like the Square Kilometre Array and TMT. In 2019, the Canadian Astronomy Data Centre (CADC) delivered over 2 Petabytes of data (over 200 million individual files) to thousands of astronomers in Canada and in over 80 other countries. The cloud processing system completed over 6 million jobs (over 1100 core years) in 2019.

Canadian Biodiversity Information Facility

Système canadien d'information sur la biodiversité

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!!! <<< the repository is offline >>> !!! The CBIF provides primary data on biological species of interest to Canadians. CBIF supports a wide range of social and economic decisions including efforts to conserve our biodiversity in healthy ecosystems, use our biological resources in sustainable ways, and monitor and control pests and diseases. Tools provided by the CBIF include the Integrated Taxonomic Information System (ITIS), Species Access Network, Online Mapping, and the SpeciesBank, including Butterflies of Canada. The CBIF is a member of the Global Biodiversity Information Facility (GBIF).

ChIP-Seq Transcription Factor Data

ChIP-Seq

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We developed a method, ChIP-sequencing (ChIP-seq), combining chromatin immunoprecipitation (ChIP) and massively parallel sequencing to identify mammalian DNA sequences bound by transcription factors in vivo. We used ChIP-seq to map STAT1 targets in interferon-gamma (IFN-gamma)-stimulated and unstimulated human HeLa S3 cells, and compared the method's performance to ChIP-PCR and to ChIP-chip for four chromosomes.For both Chromatin- immunoprecipation Transcription Factors and Histone modifications. Sequence files and the associated probability files are also provided.