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Found 5 result(s)

Antimicrobial Combination Networks

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The database aims to bridge the gap between agent repositories and studies documenting the effect of antimicrobial combination therapies. Most notably, our primary aim is to compile data on the combination of antimicrobial agents, namely natural products such as AMP. To meet this purpose, we have developed a data curation workflow that combines text mining, manual expert curation and graph analysis and supports the reconstruction of AMP-Drug combinations.

The SuiteSparse Matrix Collection

UFL, Sparse Matrix Collection

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The SuiteSparse Matrix Collection is a large and actively growing set of sparse matrices that arise in real applications. The Collection is widely used by the numerical linear algebra community for the development and performance evaluation of sparse matrix algorithms. It allows for robust and repeatable experiments. Its matrices cover a wide spectrum of domains, include those arising from problems with underlying 2D or 3D geometry (as structural engineering, computational fluid dynamics, model reduction, electromagnetics, semiconductor devices, thermodynamics, materials, acoustics, computer graphics/vision, robotics/kinematics, and other discretizations) and those that typically do not have such geometry (optimization, circuit simulation, economic and financial modeling, theoretical and quantum chemistry, chemical process simulation, mathematics and statistics, power networks, and other networks and graphs.

virus mentha

the interactome browser

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virus mentha archives evidence about viral interactions collected from different sources and presents these data in a complete and comprehensive way. Its data comes from manually curated protein-protein interaction databases that have adhered to the IMEx consortium. virus mentha is a resource that offers a series of tools to analyse selected proteins in the context of a network of interactions. Protein interaction databases archive protein-protein interaction (PPI) information from published articles. However, no database alone has sufficient literature coverage to offer a complete resource to investigate "the interactome". virus mentha's approach generates every week a consistent interactome (graph). Most importantly, the procedure assigns to each interaction a reliability score that takes into account all the supporting evidence. virus mentha offers direct access to viral families such as: Orthomyxoviridae, Orthoretrovirinae and Herpesviridae plus, it offers the unique possibility of searching by host organism. The website and the graphical application are designed to make the data stored in virus mentha accessible and analysable to all users.virus mentha superseeds VirusMINT. The Source databases are: MINT, DIP, IntAct, MatrixDB, BioGRID.

Canadian Ice Service Archive

CISA

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The Canadian Ice Service (CIS), a division of the Meteorological Service of Canada (MSC), is the leading authority for information about ice in Canada's navigable waters. The Canadian Ice Service Archive (CISA) allows online access to the following collections: Daily ice analysis charts (since 1999), Regional ice analysis charts, and Weekly ice thickness and on-ice snow depth measurements for Canadian stations.

KONECT

Koblenz Network Collection

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This is the KONECT project, a project in the area of network science with the goal to collect network datasets, analyse them, and make available all analyses online. KONECT stands for Koblenz Network Collection, as the project has roots at the University of Koblenz–Landau in Germany. All source code is made available as Free Software, and includes a network analysis toolbox for GNU Octave, a network extraction library, as well as code to generate these web pages, including all statistics and plots. KONECT contains over a hundred network datasets of various types, including directed, undirected, bipartite, weighted, unweighted, signed and rating networks. The networks of KONECT are collected from many diverse areas such as social networks, hyperlink networks, authorship networks, physical networks, interaction networks and communication networks. The KONECT project has developed network analysis tools which are used to compute network statistics, to draw plots and to implement various link prediction algorithms. The result of these analyses are presented on these pages. Whenever we are allowed to do so, we provide a download of the networks.