Filter
Reset all

Subjects

Content Types

Countries

AID systems

API

Certificates

Data access

Data access restrictions

Database access

Database access restrictions

Database licenses

Data licenses

Data upload

Data upload restrictions

Enhanced publication

Institution responsibility type

Institution type

Keywords

Metadata standards

PID systems

Provider types

Quality management

Repository languages

Software

Syndications

Repository types

Versioning

  • * at the end of a keyword allows wildcard searches
  • " quotes can be used for searching phrases
  • + represents an AND search (default)
  • | represents an OR search
  • - represents a NOT operation
  • ( and ) implies priority
  • ~N after a word specifies the desired edit distance (fuzziness)
  • ~N after a phrase specifies the desired slop amount
Found 71 result(s)

ALlele FREquency Database

ALFRED

Subject(s)
Content type(s)
Country
We are working on a new version of ALFRED web interface. The current web interface will not be available from December 15th, 2023. There will be a period where a public web interface is not available for viewing ALFRED data. Expected date for the deployment of the new ALFRED web interface with minimum functions is March 1st, 2024 --------------------------------------------- ALFRED is a free, web-accessible, curated compilation of allele frequency data on DNA sequence polymorphisms in anthropologically defined human populations. ALFRED is distinct from such databases as dbSNP, which catalogs sequence variation.

AmoebaDB

Subject(s)
Content type(s)
Country
AmoebaDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for Entamoeba and Acanthamoeba parasites. In its first iteration (released in early 2010), AmoebaDB contains the genomes of three Entamoeba species (see below). AmoebaDB integrates whole genome sequence and annotation and will rapidly expand to include experimental data and environmental isolate sequences provided by community researchers . The database includes supplemental bioinformatics analyses and a web interface for data-mining.

AmphibiaWeb

Subject(s)
Content type(s)
Country
AmphibiaWeb is an online system enabling any user to search and retrieve information relating to amphibian biology and conservation. This site was motivated by the global declines of amphibians, the study of which has been hindered by the lack of multidisplinary studies and a lack of coordination in monitoring, in field studies, and in lab studies. We hope AmphibiaWeb will encourage a shared vision to collaboratively face the challenge of global amphibian declines and the conservation of remaining amphibians and their habitats.

Apollo

DSpace@Cambridge

Subject(s)
Content type(s)
Country
Apollo (previously DSpace@Cambridge) is the University of Cambridge’s Institutional Repository (IR), preserving and providing access to content created by members of the University. The repository stores a range of content and provides different levels of access, but its primary focus is on providing open access to the University’s research publications.

Archaeological Map of the Czech Republic

Archeologická mapa České republiky

Subject(s)
Content type(s)
Country
The Archaeological Map of the Czech Republic (AMCR) is a repository designed for information on archaeological investigations, sites and finds, operated by the Archaeological Institutes of the CAS in Prague and Brno. The archives of these institutions contain documentation of archaeological fieldwork on the territory of the Czech Republic from 1919 to the present day, and they continue to enrich their collections. The AMCR database and related documents form the largest collection of archaeological data concerning the Czech Republic and are therefore an important part of our cultural heritage. The AMCR digital archive contains various types of records - individual archaeological documents (texts, field photographs, aerial photographs, maps and plans, digital data), projects, fieldwork events, archaeological sites, records of individual finds and a library of 3D models. Data and descriptive information are continuously taken from the AMCR and presented in the the AMCR Digital Archive interface.

Archaeology Data Service

ADS

Subject(s)
Content type(s)
Country
The ADS is an accredited digital repository for heritage data that supports research, learning and teaching with freely available, high quality and dependable digital resources by preserving and disseminating digital data in the long term. The ADS also promotes good practice in the use of digital data, provides technical advice to the heritage community, and supports the deployment of digital technologies.

AspGD

Aspergillus Genome Database

Subject(s)
Content type(s)
Country
>>>>!!!!<<<< AspGD data are being integrated into FungiDB. Please click here for additional details http://fungidb.org/ . Discussion of how to maximize the value of FungiDB for the Aspergillus research community will be a major topic at the upcoming AsperFest12 meeting at Asilomar (March 16-17, 2015). >>>>!!!!<<<< AspGD is an organized collection of genetic and molecular biological information about the filamentous fungi of the genus Aspergillus. Among its many species, the genus contains an excellent model organism (A. nidulans, or its teleomorph Emericella nidulans), an important pathogen of the immunocompromised (A. fumigatus), an agriculturally important toxin producer (A. flavus), and two species used in industrial processes (A. niger and A. oryzae). AspGD contains information about genes and proteins of multiple Aspergillus species; descriptions and classifications of their biological roles, molecular functions, and subcellular localizations; gene, protein, and chromosome sequence information; tools for analysis and comparison of sequences; and links to literature information; as well as a multispecies comparative genomics browser tool (Sybil) for exploration of orthology and synteny across multiple sequenced Aspergillus species.

ASU Library Research Data Repository

Arizona State University Dataverse

Subject(s)
Content type(s)
Country
The Arizona State University (ASU) Research Data Repository provides a platform for ASU-affiliated researchers to share, preserve, cite, and make research data accessible and discoverable. The ASU Research Data Repository provides a permanent digital identifier for research data, which complies with data sharing policies. The repository is powered by the Dataverse open-source application, developed and used by Harvard University. Both the ASU Research Data Repository and the KEEP Institutional Repository are managed by the ASU Library to ensure research produced at Arizona State University is discoverable and accessible to the global community.

Bioconductor

Open Source Software for Bioinformatics

Subject(s)
Content type(s)
Country
Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statistical programming language, and is open source and open development. It has two releases each year, and an active user community. Bioconductor is also available as an AMI (Amazon Machine Image) and a series of Docker images.

Biodiversity Exploratories Information System

BExIS

Subject(s)
Content type(s)
Country
BExIS is the online data repository and information system of the Biodiversity Exploratories Project (BE). The BE is a German network of biodiversity related working groups from areas such as vegetation and soil science, zoology and forestry. Up to three years after data acquisition, the data use is restricted to members of the BE. Thereafter, the data is usually public available (https://www.bexis.uni-jena.de/ddm/publicsearch/index).

BioSample

BioSample at the NCBI

Subject(s)
Content type(s)
Country
The BioSample database contains descriptions of biological source materials used in experimental assays.

BonaRes Repository

Publishing research data from agricultural domain

Subject(s)
Content type(s)
Country
The BonaRes Repository stores, manage and publishes soil and agricultural research data from research projects, agricultural long-term field experiments and soil profiles which contribute significantly to the analysis of changes of soil and soil functions over the long term. Research data are described by the metadata following the BonaRes Metadata Schema (DOI: 10.20387/bonares-5pgg-8yrp) which combines international recognized standards for the description of geospatial data (INSPIRE Directive) and research data (DataCite 4.0). Metadata includes AGROVOC keywords. Within the BonaRes Repository research data is provided for free reuse under the CC License and can be discovered by advanced text and map search via a number of criteria.

Brain Analysis Library of Spatial maps and Atlases

BALSA

Subject(s)
Content type(s)
Country
Brain Analysis Library of Spatial maps and Atlases (BALSA) is a database for hosting and sharing neuroimaging and neuroanatomical datasets for human and primate species. BALSA houses curated, user-created Study datasets, extensively analyzed neuroimaging data associated with published figures and Reference datasets mapped to brain atlas surfaces and volumes in human and nonhuman primates as a general resource (e.g., published cortical parcellations).

CCCA Data Server

Climate Change Centre Austria Data Centre

Subject(s)
Content type(s)
Country
The Climate Change Centre Austria - Data Centre provides the central national archive for climate data and information. The data made accessible includes observation and measurement data, scenario data, quantitative and qualitative data, as well as the measurement data and findings of research projects.

Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations

CALIPSO

Subject(s)
Content type(s)
Country
The CALIPSO satellite provides new insight into the role that clouds and atmospheric aerosols play in regulating Earth's weather, climate, and air quality. CALIPSO combines an active lidar instrument with passive infrared and visible imagers to probe the vertical structure and properties of thin clouds and aerosols over the globe. CALIPSO was launched on April 28, 2006, with the CloudSat satellite. CALIPSO and CloudSat are highly complementary and together provide new, never-before-seen 3D perspectives of how clouds and aerosols form, evolve, and affect weather and climate. CALIPSO and CloudSat fly in formation with three other satellites in the A-train constellation to enable an even greater understanding of our climate system.

DANDI

Distributed Archives for Neurophysiology Data Integration

Subject(s)
Content type(s)
Country
The US BRAIN Initiative archive for publishing and sharing neurophysiology data including electrophysiology, optophysiology, and behavioral time-series, and images from immunostaining experiments.

DaRUS

Data Repository of the University of Stuttgart

Subject(s)
Content type(s)
Country
DaRUS, the data repository of the University of Stuttgart, offers a secure location for research data and codes, be it for the administration of own data, for exchange within a research group, for sharing with selected partners or for publishing.

DataON Repository

previous name: KORD

Subject(s)
Content type(s)
Country
DataON is Korea's National Research Data Platform. It provides integrated search of metadata for KISTI's research data and domestic and international research data and links to raw data. DataON allows users (researchers, policy makers, etc.) to perform the following tasks: Easily search for various types of research data in all scientific fields. By registering research results, research data can be posted and cited. Build a community among researchers and enable collaborative research. It provides a data analysis environment that allows one-stop analysis of discovered research data.

DataStream

Subject(s)
Content type(s)
Country
DataStream is an open access platform for sharing information on freshwater health. It currently allows users to access, visualize, and download full water quality datasets collected by Indigenous Nations, community groups, researchers and governments throughout five regional hubs: Atlantic Canada, the Great Lakes and Saint Lawrence region, the Lake Winnipeg Basin, the Mackenzie River Basin and the Pacific region. DataStream was developed by The Gordon Foundation and is carried out in collaboration with regional monitoring networks.

dbSNP

SNV

Subject(s)
Content type(s)
Country
The NCBI Short Genetic Variations database, commonly known as dbSNP, catalogs short variations in nucleotide sequences from a wide range of organisms. These variations include single nucleotide variations, short nucleotide insertions and deletions, short tandem repeats and microsatellites. Short Genetic Variations may be common, thus representing true polymorphisms, or they may be rare. Some rare human entries have additional information associated withthem, including disease associations, genotype information and allele origin, as some variations are somatic rather than germline events. ***NCBI will phase out support for non-human organism data in dbSNP and dbVar beginning on September 1, 2017***

Digital Library for Earth System Education

DLESE

Subject(s)
Content type(s)
Country
<<<!!!<<< This repository is no longer available. >>>!!!>>>

DisProt

Database of Protein Disorder

Subject(s)
Content type(s)
Country
The Database of Protein Disorder (DisProt) is a curated database that provides information about proteins that lack fixed 3D structure in their putatively native states, either in their entirety or in part. DisProt is a community resource annotating protein sequences for intrinsically disorder regions from the literature. It classifies intrinsic disorder based on experimental methods and three ontologies for molecular function, transition and binding partner.

Duke Research Data Repository

Duke RDR

Subject(s)
Content type(s)
Country
The Duke Research Data Repository is a service of the Duke University Libraries that provides curation, access, and preservation of research data produced by the Duke community. Duke's RDR is a discipline agnostic institutional data repository that is intended to preserve and make public data related to the teaching and research mission of Duke University including data linked to a publication, research project, and/or class, as well as supplementary software code and documentation used to provide context for the data.

Earth System Research Laboratory - Global Monitoring Laboratory

ESRL GML

Subject(s)
Content type(s)
Country
Earth System Research Laboratory (ESRL) Global Monitoring Division (GMD) provides data relating to climate change forces and models, ozone depletion and rehabilitation, and baseline air quality. Data are freely available so the public, policy makers, and scientists stay current with long-term atmospheric trends.

Earthdata powered by EOSDIS

Earth Observing System Data and Information System

Subject(s)
Content type(s)
Country
Earthdata powered by EOSDIS (Earth Observing System Data and Information System) is a key core capability in NASA’s Earth Science Data Systems Program. It provides end-to-end capabilities for managing NASA’s Earth science data from various sources – satellites, aircraft, field measurements, and various other programs. EOSDIS uses the metadata and service discovery tool Earthdata Search https://search.earthdata.nasa.gov/search. The capabilities of EOSDIS constituting the EOSDIS Science Operations are managed by NASA's Earth Science Data and Information System (ESDIS) Project. The capabilities include: generation of higher level (Level 1-4) science data products for several satellite missions; archiving and distribution of data products from Earth observation satellite missions, as well as aircraft and field measurement campaigns. The EOSDIS science operations are performed within a distributed system of many interconnected nodes - Science Investigator-led Processing Systems (SIPS), and distributed, discipline-specific, Earth science Distributed Active Archive Centers (DAACs) with specific responsibilities for production, archiving, and distribution of Earth science data products. The DAACs serve a large and diverse user community by providing capabilities to search and access science data products and specialized services.