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Found 120 result(s)

PeptideAtlas

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The PeptideAtlas validates expressed proteins to provide eukaryotic genome data. Peptide Atlas provides data to advance biological discoveries in humans. The PeptideAtlas accepts proteomic data from high-throughput processes and encourages data submission.

Australian National Corpus

AusNC

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The Australian National Corpus collates and provides access to assorted examples of Australian English text, transcriptions, audio and audio-visual materials. Text analysis tools are embedded in the interface allowing analysis and downloads in *.CSV format.

Life Science Database Archive

LSDB Archive

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The Life Science Database Archive maintains and stores the datasets generated by life scientists in Japan in a long-term and stable state as national public goods. The Archive makes it easier for many people to search datasets by metadata (description of datasets) in a unified format, and to access and download the datasets with clear terms of use. In addition, the Archive provides datasets in forms friendly to different types of users in public and private institutions, and thereby supports further contribution of each research to life science.

TopFIND

The public knowledgebase for protein termini and protease processing

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TopFIND is a protein-centric database for the annotation of protein termini currently in its third version. Non-canonical protein termini can be the result of multiple different biological processes, including pre-translational processes such as alternative splicing and alternative translation initiation or post-translational protein processing by proteases that cleave proteases as part of protein maturation or as a regulatory modification. Accordingly, protein termini evidence in TopFIND is inferred from other databases such as ENSEMBL transcripts, TISdb for alternative translation initiation, MEROPS for protein cleavage by proteases, and UniProt for canonical and protein isoform start sites.

IMGT/LIGM-DBI

International ImMunoGeneTics information system / Laboratoire d'ImmunoGénétique Moléculaire-Database

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IMGT/LIGM-DB is a comprehensive database of Immunoglobulins (IG) and T cell Receptors (TR) from human and other vertebrates, with translation for fully annotated sequences.

NGEE Tropics

Next-Generation Ecosystem Experiments - Tropics

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The future of tropical forests matter to future climate. NGEE-Tropics is advancing model predictions of tropical forest carbon cycle responses to a changing climate over the 21st Century.

Genome Warehouse

GWH

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The Genome Warehouse (GWH) is a public repository housing genome-scale data for a wide range of species and delivering a series of web services for genome data submission, storage, release and sharing.

Élections Québec's Open Data

Données ouvertes d'Élections Québec

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Élections Québec's Open Data is available on this website is accessible to everyone, but is mostly used by media, IT developers and researchers. It is used, among other things, on websites, for applications and in studies.

LDbase

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A research data repository for the education and developmental sciences.

Scripps Institute of Oceanography Explorer

Scripps Explorer

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Scripps Institute of Oceanography (SIO) Explorer includes five federated collections: SIO Cruises, SIO Historic Photographs, the Seamounts, Marine Geological Samples, and the Educator’s Collection, all part of the US National Science Digital Library (NSDL). Each collection represents a unique resource of irreplaceable scientific research. The effort is collaboration among researchers at Scripps, computer scientists from the San Diego Supercomputer Center (SDSC), and archivists and librarians from the UCSD Libraries. In 2005 SIOExplorer was extended to the Woods Hole Oceanographic Institution with the Multi-Institution Scalable Digital Archiving project, funded through the joint NSF/Library of Congress digital archiving and preservation program, creating a harvesting methodology and a prototype collection of cruises, Alvin submersible dives and Jason ROV lowerings.

GiardiaDB

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Giardia lamblia is a significant, environmentally transmitted, human pathogen and an amitochondriate protist. It is a major contributor to the enormous worldwide burden of human diarrheal diseases, yet the basic biology of this parasite is not well understood. No virulence factor has been identified. The Giardia lamblia genome contains only 12 million base pairs distributed onto five chromosomes. Its analysis promises to provide insights about the origins of nuclear genome organization, the metabolic pathways used by parasitic protists, and the cellular biology of host interaction and avoidance of host immune systems. Since the divergence of Giardia lamblia lies close to the transition between eukaryotes and prokaryotes in universal ribosomal RNA phylogenies, it is a valuable, if not unique, model for gaining basic insights into genetic innovations that led to formation of eukaryotic cells. In evolutionary terms, the divergence of this organism is at least twice as ancient as the common ancestor for yeast and man. A detailed study of its genome will provide insights into an early evolutionary stage of eukaryotic chromosome organization as well as other aspects of the prokaryotic / eukaryotic divergence.

Energy Data Centre

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The Energy Data Centre holds information relating to energy research, focused on the UK. It has a research data catalogue, information on publications resulting from the UK Energy Research Centre and the Energy Technologies Institute and energy research related grants.

GENCODE

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GENCODE is a scientific project in genome research and part of the ENCODE (ENCyclopedia Of DNA Elements) scale-up project. The GENCODE consortium was initially formed as part of the pilot phase of the ENCODE project to identify and map all protein-coding genes within the ENCODE regions (approx. 1% of Human genome). Given the initial success of the project, GENCODE now aims to build an “Encyclopedia of genes and genes variants” by identifying all gene features in the human and mouse genome using a combination of computational analysis, manual annotation, and experimental validation, and annotating all evidence-based gene features in the entire human genome at a high accuracy.

Mammalian Transcriptomic Database

MTD

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MTD is focused on mammalian transcriptomes with a current version that contains data from humans, mice, rats and pigs. Regarding the core features, the MTD browses genes based on their neighboring genomic coordinates or joint KEGG pathway and provides expression information on exons, transcripts, and genes by integrating them into a genome browser. We developed a novel nomenclature for each transcript that considers its genomic position and transcriptional features.

Genome Sequence Archive

GSA

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GSA is a data repository specialized for archiving raw sequence reads. It supports data generated from a variety of sequencing platforms ranging from Sanger sequencing machines to single-cell sequencing machines and provides data storing and sharing services free of charge for worldwide scientific communities. In addition to raw sequencing data, GSA also accommodates secondary analyzed files in acceptable formats (like BAM, VCF). Its user-friendly web interfaces simplify data entry and submitted data are roughly organized as two parts, viz., Metadata and File, where the former can be further assorted into BioProject, BioSample, Experiment and Run, and the latter contains raw sequence reads.

Tree Atlas Project

National Botanical Research Institute Tree Atlas Project

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The Tree Atlas Project is focused on the trees and shrubs of Namibia. The project gathered and recorded information about the distribution, abundance and general biology of woody plants, which are an important resource in Namibia. The information was collected over 6 years (October 1997-December 2003) and entered into a database housed at the National Botanical Research Institute. This web site was made possible, and remains online, through the continued kind support of the Namibian Tree Atlas Project. Online version active since paper version launch date, 2005. This page last modified on: 11 February 2018, at 08:42 am (Namibian time). Site design, layout and coding by John Irish.

LacCore

National Lacustrine Core Facility

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<<<!!!<<< This record is merged into Continental Scientific Drilling Facility https://www.re3data.org/repository/r3d100012874 >>>!!!>>> LacCore curates cores and samples from continental coring and drilling expeditions around the world, and also archives metadata and contact information for cores stored at other institutions.LacCore curates cores and samples from continental coring and drilling expeditions around the world, and also archives metadata and contact information for cores stored at other institutions.

Australian Bureau of Meteorology data catalogue

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Meteorology, atmospheric science and oceanography, forecasts, current and historical observations for weather, water, space weather data; data analyses and reports.

World Data Center for Climate

DKRZ long term archive

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The mission of World Data Center for Climate (WDCC) is to provide central support for the German and European climate research community. The WDCC is member of the ISC's World Data System. Emphasis is on development and implementation of best practice methods for Earth System data management. Data for and from climate research are collected, stored and disseminated. The WDCC is restricted to data products. Cooperations exist with thematically corresponding data centres of, e.g., earth observation, meteorology, oceanography, paleo climate and environmental sciences. The services of WDCC are also available to external users at cost price. A special service for the direct integration of research data in scientific publications has been developed. The editorial process at WDCC ensures the quality of metadata and research data in collaboration with the data producers. A citation code and a digital identifier (DOI) are provided and registered together with citation information at the DOI registration agency DataCite.

FAIRequest - transfer unit for data and biomaterials

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The transfer unit for data and biomaterials at the interface between Community Medicine and Molecular Medicine at the Medical Faculty of the University Medicine Greifswald enables the use of data from the studies of the research association Community Medicine (FVCM), e.g. the "Study of Health in Pomerania" (SHIP), "Study of Neonates in Pomerania" (SNiP), or "Greifswald Approach to Individualized Medicine" (GANI_MED), coordinated with regard to application, provision and documentation.

dbSNP

SNV

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The NCBI Short Genetic Variations database, commonly known as dbSNP, catalogs short variations in nucleotide sequences from a wide range of organisms. These variations include single nucleotide variations, short nucleotide insertions and deletions, short tandem repeats and microsatellites. Short Genetic Variations may be common, thus representing true polymorphisms, or they may be rare. Some rare human entries have additional information associated withthem, including disease associations, genotype information and allele origin, as some variations are somatic rather than germline events. ***NCBI will phase out support for non-human organism data in dbSNP and dbVar beginning on September 1, 2017***

Agricultural and Environmental Data Archive

AEDA

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The Agricultural and Environmental Data Archive (AEDA) is the direct result of a project managed by the Freshwater Biological Association in partnership with the Centre for e-Research at King's College London, and funded by the Department for the Environment, Food & Rural Affairs (Defra). This project ran from January 2011 until December 2014 and was called the DTC Archive Project, because it was initially related to the Demonstration Test Catchments Platform developed by Defra. The archive was also designed to hold data from the GHG R&D Platform (www.ghgplatform.org.uk). After the DTC Archive Project was completed the finished archive was renamed as AEDA to reflect it's broader remit to archive data from any and all agricultural and environmental research activities.

Censusindia

Census India

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The Indian Census is the largest single source of a variety of statistical information on different characteristics of the people of India. With a history of more than 130 years, this reliable, time tested exercise has been bringing out a veritable wealth of statistics every 10 years, beginning from 1872 when the first census was conducted in India non-synchronously in different parts. To scholars and researchers in demography, economics, anthropology, sociology, statistics and many other disciplines, the Indian Census has been a fascinating source of data. The rich diversity of the people of India is truly brought out by the decennial census which has become one of the tools to understand and study India The responsibility of conducting the decennial Census rests with the Office of the Registrar General and Census Commissioner, India under Ministry of Home Affairs, Government of India. It may be of historical interest that though the population census of India is a major administrative function; the Census Organisation was set up on an ad-hoc basis for each Census till the 1951 Census. The Census Act was enacted in 1948 to provide for the scheme of conducting population census with duties and responsibilities of census officers. The Government of India decided in May 1949 to initiate steps for developing systematic collection of statistics on the size of population, its growth, etc., and established an organisation in the Ministry of Home Affairs under Registrar General and ex-Officio Census Commissioner, India. This organisation was made responsible for generating data on population statistics including Vital Statistics and Census. Later, this office was also entrusted with the responsibility of implementation of Registration of Births and Deaths Act, 1969 in the country.

National Genomics Data Center

国家基因组科学数据中心

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The National Genomics Data Center (NGDC), part of the China National Center for Bioinformation (CNCB), advances life & health sciences by providing open access to a suite of resources, with the aim to translate big data into big discoveries and support worldwide activities in both academia and industry.

Canue Data Portal

Canadian Urban Environmental Health Research Consortium Data Portal

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Canadian Urban Environmental Health Research Consortium (CANUE) collates and generates standard measures of environmental factors and provides these data to a wide range of health data organizations who pre-link and distribute them to the Canadian research community. Exposure metrics currently distributed by CANUE include air quality (nitrogen dioxide, sulfur dioxide, ozone, and fine particulate matter concentrations), green and blue spaces (Landsat, MODIS, and AVHRR normalized difference vegetation indices), neighborhood factors (access to employment, material and social deprivation indices, marginalization indices, nighttime light, and active living environments), and weather and climate (weather indicators, local climate zones, and water balance).