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Found 595 result(s)
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CBS offers Comprehensive public databases of DNA- and protein sequences, macromolecular structure, g ene and protein expression levels, pathway organization and cell signalling, have been established to optimise scientific exploitation of the explosion of data within biology. Unlike many other groups in the field of biomolecular informatics, Center for Biological Sequence Analysis directs its research primarily towards topics related to the elucidation of the functional aspects of complex biological mechanisms. Among contemporary bioinformatics concerns are reliable computational interpretation of a wide range of experimental data, and the detailed understanding of the molecular apparatus behind cellular mechanisms of sequence information. By exploiting available experimental data and evidence in the design of algorithms, sequence correlations and other features of biological significance can be inferred. In addition to the computational research the center also has experimental efforts in gene expression analysis using DNA chips and data generation in relation to the physical and structural properties of DNA. In the last decade, the Center for Biological Sequence Analysis has produced a large number of computational methods, which are offered to others via WWW servers.
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The World Data Centre section provides software and data catalogue information and data produced by IPS Radio and Space Services over the past few past decades. You can download data files, plot graphs from data files, check data availability, retrieve data sets and station information.
The Gene database provides detailed information for known and predicted genes defined by nucleotide sequence or map position. Gene supplies gene-specific connections in the nexus of map, sequence, expression, structure, function, citation, and homology data. Unique identifiers are assigned to genes with defining sequences, genes with known map positions, and genes inferred from phenotypic information. These gene identifiers are used throughout NCBI's databases and tracked through updates of annotation. Gene includes genomes represented by NCBI Reference Sequences (or RefSeqs) and is integrated for indexing and query and retrieval from NCBI's Entrez and E-Utilities systems.
Pubchem contains 3 databases. 1. PubChem BioAssay: The PubChem BioAssay Database contains bioactivity screens of chemical substances described in PubChem Substance. It provides searchable descriptions of each bioassay, including descriptions of the conditions and readouts specific to that screening procedure. 2. PubChem Compound: The PubChem Compound Database contains validated chemical depiction information provided to describe substances in PubChem Substance. Structures stored within PubChem Compounds are pre-clustered and cross-referenced by identity and similarity groups. 3. PubChem Substance. The PubChem Substance Database contains descriptions of samples, from a variety of sources, and links to biological screening results that are available in PubChem BioAssay. If the chemical contents of a sample are known, the description includes links to PubChem Compound.
The Prototype Data Portal allows to retrieve Data from World Data System (WDS) members. WDS ensures the long-term stewardship and provision of quality-assessed data and data services to the international science community and other stakeholders
VegBank is the vegetation plot database of the Ecological Society of America's Panel on Vegetation Classification. VegBank consists of three linked databases that contain the actual plot records, vegetation types recognized in the U.S. National Vegetation Classification and other vegetation types submitted by users, and all plant taxa recognized by ITIS/USDA as well as all other plant taxa recorded in plot records. Vegetation records, community types and plant taxa may be submitted to VegBank and may be subsequently searched, viewed, annotated, revised, interpreted, downloaded, and cited. VegBank receives its data from the VegBank community of users.
The Space Physics Data Facility (SPDF) leads in the design and implementation of unique multi-mission and multi-disciplinary data services and software to strategically advance NASA's solar-terrestrial program, to extend our science understanding of the structure, physics and dynamics of the Heliosphere of our Sun and to support the science missions of NASA's Heliophysics Great Observatory. Major SPDF efforts include multi-mission data services such as Heliophysics Data Portal (formerly VSPO), CDAWeb and CDAWeb Inside IDL,and OMNIWeb Plus (including COHOWeb, ATMOWeb, HelioWeb and CGM) , science planning and orbit services such as SSCWeb, data tools such as the CDF software and tools, and a range of other science and technology research efforts. The staff supporting SPDF includes scientists and information technology experts.
MIT’s implementation of OpenGeoportal is called MIT Geoweb. It was collaboratively developed as an open source, federated web application to discover, preview, and retrieve geospatial data from different repositories. Several of the country's leading universities and a state agency have formed a partnership to make thousands of geospatial data layers available through a single, open source interface. The application also incorporates some new innovative search techniques. Partners include Tufts, Harvard, MIT, Princeton, MassGIS, Stanford and UC Berkeley. The single interface is skinnable and may have slight differences in appearance based on the institution hosting the application. You can search for GIS data held in the MIT Geodata Repository and other local colleges.
CLARIN is a European Research Infrastructure for the Humanities and Social Sciences, focusing on language resources (data and tools). It is being implemented and constantly improved at leading institutions in a large and growing number of European countries, aiming at improving Europe's multi-linguality competence. CLARIN provides several services, such as access to language data and tools to analyze data, and offers to deposit research data, as well as direct access to knowledge about relevant topics in relation to (research on and with) language resources. The main tool is the 'Virtual Language Observatory' providing metadata and access to the different national CLARIN centers and their data.
The European Bioinformatics Institute (EBI) has a long-standing mission to collect, organise and make available databases for biomolecular science. It makes available a collection of databases along with tools to search, download and analyse their content. These databases include DNA and protein sequences and structures, genome annotation, gene expression information, molecular interactions and pathways. Connected to these are linking and descriptive data resources such as protein motifs, ontologies and many others. In many of these efforts, the EBI is a European node in global data-sharing agreements involving, for example, the USA and Japan.
Our mission is to provide the data services, tools, and cyberinfrastructure leadership that advance earth-system science, enhance educational opportunities, and broaden participation. Unidata's main RAMADDA server (hosted on Unidata's motherlode data server) contains access to a variety of datasets including the full IDD feed, Case Studies and other project data.
FORS is the Swiss Centre of Expertise in the Social Sciences. FORS implements large-scale national and international surveys, offers data and research information services to researchers and academic institutions, and conducts methodological and thematic research. DARIS is its resource centre for research and teaching in the social sciences and archives, disseminates and promotes quantitative and qualitative data . It maintains a comprehensive and up-to-date inventory of social science research projects in Switzerland. In addition, our data service makes available a wide range of datasets for secondary analysis. Databases at DARIS are: FORSbase, COMPASS
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ZACAT is a social science data portal allowing you to search for, browse, analyse and download social science survey data, provided by GESIS - Leibniz Institute for the Social Sciences. ZACAT includes data from International Social Survey Programme (ISSP), Comparative Study of Electoral Systems (CSES), Eurobarometer, European Values Study (EVS), Studies from Eastern Europe, ALLBUS, Politbarometer (German documentation), Election Studies (Germany), Childhood, adolescence and becoming an adult, and LebensRäume.
The Woods Hole Open Access Server, WHOAS, is an institutional repository that captures, stores, preserves, and redistributes the intellectual output of the Woods Hole scientific community in digital form. WHOAS is managed by the MBLWHOI Library as a service to the Woods Hole scientific community
This Animal Quantitative Trait Loci (QTL) database (Animal QTLdb) is designed to house all publicly available QTL and trait mapping data (i.e. trait and genome location association data; collectively called "QTL data" on this site) on livestock animal species for easily locating and making comparisons within and between species. New database tools are continuely added to align the QTL and association data to other types of genome information, such as annotated genes, RH / SNP markers, and human genome maps. Besides the QTL data from species listed below, the QTLdb is open to house QTL/association date from other animal species where feasible. Note that the JAS along with other journals, now require that new QTL/association data be entered into a QTL database as part of their publication requirements.
SCEC's mission includes gathering data on earthquakes, both in Southern California and other locales; integrate the information into a comprehensive understanding of earthquake phenomena; and communicate useful knowledge for reducing earthquake risk to society at large. The SCEC community consists of more than 600 scientists from 16 core institutions and 47 additional participating institutions. SCEC is funded by the National Science Foundation and the U.S. Geological Survey.
The RRUFF Project is creating a complete set of high quality spectral data from well characterized minerals and is developing the technology to share this information with the world. The collected data provides a standard for mineralogists, geoscientists, gemologists and the general public for the identification of minerals both on earth and for planetary exploration.Electron microprobe analysis is used to determine the chemistry of each mineral.
The Entrez Protein Clusters database contains annotation information, publications, structures and analysis tools for related protein sequences encoded by complete genomes. The data available in the Protein Clusters Database is generated from prokaryotic genomic studies and is intended to assist researchers studying micro-organism evolution as well as other biological sciences. Available genomes include plants and viruses as well as organelles and microbial genomes.
TeachingWithData.org is a portal where faculty can find resources and ideas to reduce the challenges of bringing real data into post-secondary classes. It allows faculty to introduce and build students' quantitative reasoning abilities with readily available, user-friendly, data-driven teaching materials.
The NCAA Student-Athlete Experiences Data Archive provides access to data about student athletes and will grow to include a handful of user-friendly data collections related to graduation rates; team-level Academic Progress Rates in Division I; and individual-level data on the experiences of current and former student-athletes from the NCAA's Growth, Opportunities, Aspirations and Learning of Students in college study (GOALS), and the Study of College Outcomes and Recent Experiences (SCORE). In the long run, the NCAA expects to follow this initial release with the publication of as much data as possible from its archives. The data is used by college presidents, athletic personnel, faculty, student-athlete groups, media members, and researchers in looking at issues related to intercollegiate athletics and higher education.
Swiss Institute of Bioinformatics (SIB) coordinates research and education in bioinformatics throughout Switzerland and provides bioinformatics services to the national and international research community. ExPASy gives access to numerous repositories and databases of SIB. For example: array map, MetaNetX, SWISS-MODEL and World-2DPAGE, and many others see a list here http://www.expasy.org/resources
The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.
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The Atlantic Canada Conservation Data Centre (ACCDC) maintains comprehensive lists of plant and animal species. The Atlantic CDC has geo-located records of species occurrences and records of extremely rare to uncommon species in the Atlantic region, including New Brunswick, Nova Scotia, Prince Edward Island, Newfoundland, and Labrador. The Atlantic CDC also maintains biological and other types of data in a variety of linked databases.
The Global Hydrology Resource Center (GHRC) provides both historical and current Earth science data, information, and products from satellite, airborne, and surface-based instruments. GHRC acquires basic data streams and produces derived products from many instruments spread across a variety of instrument platforms.