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Found 161 result(s)
The IPD-IMGT/HLA Database provides a specialist database for sequences of the human major histocompatibility complex (MHC) and includes the official sequences named by the WHO Nomenclature Committee For Factors of the HLA System. The IPD-IMGT/HLA Database is part of the international ImMunoGeneTics project (IMGT). The database uses the 2010 naming convention for HLA alleles in all tools herein. To aid in the adoption of the new nomenclature, all search tools can be used with both the current and pre-2010 allele designations. The pre-2010 nomenclature designations are only used where older reports or outputs have been made available for download.
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The open government portal is a collection of datasets and publications by government departments and agencies. The public can use and access this data freely to learn more about how government works, carry out research or build web apps. The portal functions as both a library for current publications and as an archive for old publications which have historic value.
This site provides access to complete, annotated genomes from bacteria and archaea (present in the European Nucleotide Archive) through the Ensembl graphical user interface (genome browser). Ensembl Bacteria contains genomes from annotated INSDC records that are loaded into Ensembl multi-species databases, using the INSDC annotation import pipeline.
The Electron Microscopy Data Bank (EMDB) is a public repository for electron microscopy density maps of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, electron tomography, and electron (2D) crystallography.
The dbVar is a database of genomic structural variation containing data from multiple gene studies. Users can browse data containing the number of variant cells from each study, and filter studies by organism, study type, method and genomic variant. Organisms include human, mouse, cattle and several additional animals. ***NCBI will phase out support for non-human organism data in dbSNP and dbVar beginning on September 1, 2017 ***
The Exome Aggregation Consortium (ExAC) is a coalition of investigators seeking to aggregate and harmonize exome sequencing data from a wide variety of large-scale sequencing projects, and to make summary data available for the wider scientific community. The data set provided on this website spans 60,706 unrelated individuals sequenced as part of various disease-specific and population genetic studies.
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The Global Proteome Machine (GPM) is a protein identification database. This data repository allows users to post and compare results. GPM's data is provided by contributors like The Informatics Factory, University of Michigan, and Pacific Northwestern National Laboratories. The GPM searchable databases are: GPMDB, pSYT, SNAP, MRM, PEPTIDE and HOT.
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SMOKA provides public science data obtained at Subaru Telescope, 188cm telescope at Okayama Astrophysical Observatory, 105cm Schmidt telescope at Kiso Observatory (University of Tokyo), MITSuME, and KANATA Telescope at Higashi-Hiroshima Observatory. It is intended mainly for astronomical researchers.
The Solar Data Analysis Center serves data from recent and current space-based solar-physics missions, funds and hosts much of the SolarSoft library, and leads the Virtual Solar Observatory (VSO) effort. SDAC is the active archive, providing network access to data from such missions as SOHO, Yohkoh, and TRACE.
MassIVE is a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data. MassIVE datasets can be assigned ProteomeXchange accessions to satisfy publication requirements.
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HYdrological cycle in the Mediterranean EXperiemnt. Considering the science and societal issues motivating HyMeX, the programme aims to : improve our understanding of the water cycle, with emphasis on extreme events, by monitoring and modelling the Mediterranean atmosphere-land-ocean coupled system, its variability from the event to the seasonal and interannual scales, and its characteristics over one decade (2010-2020) in the context of global change, assess the social and economic vulnerability to extreme events and adaptation capacity.The multidisciplinary research and the database developed within HyMeX should contribute to: improve observational and modelling systems, especially for coupled systems, better predict extreme events, simulate the long-term water-cycle more accurately, provide guidelines for adaptation measures, especially in the context of global change.
The WDCGG archives measurement data for greenhouse and related gases in the atmosphere and the ocean (77 gaseous species as of 31 December 2009). The data are classified into six categories according to the observation platforms or methods used (see WDCGG Data Submission and Dissemination Guide). Air observation at stationary platform Air observation by mobile platforms (e.g. aircraft, ships, etc.) Vertical profile observation of air (e.g. multi-height observation using a tower) Hydrographic sampling observation by ships Ice core observation Observation of surface seawater and overlying air
The Data Library and Archives (DLA) is part of the joint library system supported by the Marine Biological Laboratory and the Woods Hole Oceanographic Institution. The DLA holds collections of administrative records, photographs, scientists' data and papers, film and video, historical instruments, as well as books, journals and technical reports.
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The CDC Data Catalogue describes the Climate Data of the DWD and provides access to data, descriptions and access methods. Climate Data refers to observations, statistical indices and spatial analyses. CDC comprises Climate Data for Germany, but also global Climate Data, which were collected and processed in the framework of international co-operation. The CDC Data Catalogue is under construction and not yet complete. The purposes of the CDC Data Catalogue are: to provide uniform access to climate data centres and climate datasets of the DWD to describe the climate data according to international metadata standards to make the catalogue information available on the Internet to support the search for climate data to facilitate the access to climate data and climate data descriptions
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The Coriolis Data Centre handles operational oceanography measurements made in situ, complementing the measurement of the ocean surface made using instruments aboard satellites. This work is realised through the establishment of permanent networks with data collected by ships or autonomous systems that are either fixed or drifting. This data can be used to construct a snapshot of water mass structure and current intensity.
The objective of this database is to stimulate the exchange of information and the collaboration between researchers within the ChArMEx community. However, this community is not exclusive and researchers not directly involved in ChArMEx, but who wish to contribute to the achievements of ChArMEx scientific and/or educational goals are welcome to join-in. The database is a depository for all the data collected during the various projects that contribute to ChArMEx coordinated program. It aims at documenting, storing and distributing the data produced or used by the project community. However, it is also intended to host datasets that were produced outside the ChArMEx program but which are meaningful to ChArMEx scientific and/or educational goals. Any data owner who wishes to add or link his dataset to ChArMEx database is welcome to contact the database manager in order to get help and support. The ChArMEx database includes past and recent geophysical in situ observations, satellite products and model outputs. The database organizes the data management and provides data services to end-users of ChArMEx data. The database system provides a detailed description of the products and uses standardized formats whenever it is possible. It defines the access rules to the data and details the mutual rights and obligations of data providers and users (see ChArMEx data and publication policy). The database is being developed jointly by : SEDOO, OMP Toulouse , ICARE, Lille and ESPRI, IPSL Paris
PDBe is the European resource for the collection, organisation and dissemination of data on biological macromolecular structures. In collaboration with the other worldwide Protein Data Bank (wwPDB) partners - the Research Collaboratory for Structural Bioinformatics (RCSB) and BioMagResBank (BMRB) in the USA and the Protein Data Bank of Japan (PDBj) - we work to collate, maintain and provide access to the global repository of macromolecular structure data. We develop tools, services and resources to make structure-related data more accessible to the biomedical community.
HunCLARIN is a strategic research infrastructure of Hungary’s leading knowledge centres involved in R&D in speech- and language processing. It contains linguistic resources and tools that form the basis of research. The infrastructure has obtained an “SKI” qualification (Strategic Research Infrastructure) in 2010, and has been significantly expanded since. Currently comprising 36 members, the infrastructure includes several general- and specific-purpose text corpora, different language processing tools and analysers, linguistic databases as well as ontologies. RIL HAS was a co-founder of the European CLARIN project, which aims at supporting humanities and social sciences research with the help of language technology and by making digital linguistic resources more easily available. In accordance with these goals HunClarin makes the research infrastructures developed by the respective centres directly accessible for researchers through a common network entry point. A general goal of the infrastructure is to realise the interoperability of the collected research infrastructures and to enable comparing the performance of the respective alternatives and to coordinate different foci in R&D. The coordinator and contact person of the infrastructure is Tamás Váradi, RIL HAS.
Originally named the Radiation Belt Storm Probes (RBSP), the mission was re-named the Van Allen Probes, following successful launch and commissioning. For simplicity and continuity, the RBSP short-form has been retained for existing documentation, file naming, and data product identification purposes. The RBSPICE investigation including the RBSPICE Instrument SOC maintains compliance with requirements levied in all applicable mission control documents.
Rhea is a freely available and comprehensive resource of expert-curated biochemical reactions. It has been designed to provide a non-redundant set of chemical transformations for applications such as the functional annotation of enzymes, pathway inference and metabolic network reconstruction. There are three types of reaction participants (reactants and products): Small molecules, Rhea polymers, Generic compounds. All three types of reaction participants are linked to the ChEBI database (Chemical Entities of Biological Interest) which provides detailed information about structure, formula and charge. Rhea provides built-in validations that ensure both mass and charge balance of the reactions. We have populated the database with the reactions found in the enzyme classification (i.e. in the IntEnz and ENZYME databases), extending it with additional known reactions of biological interest. While the main focus of Rhea is enzyme-catalysed reactions, other biochemical reactions (including those that are often termed "spontaneous") also are included.
The WDC has a FTP-server to distribute the PCN index derived from the geomagnetic observatory Qaanaaq (THL) and the Kp-index data products derived at the geomagnetic observatory Niemegk (NGK). The WDC is also holding extensive archives of magnetograms and other geomagnetic observatory data products that predate the introduction of digital data recording. The material is in analogue form such as film or microfiche. The Polar Cap index (abbreviation PC index) consists of the Polar Cap North (PCN) and the Polar Cap South (PCS) index, which are derived from magnetic measurements taken at the geomagnetic observatories Qaanaaq (THL, Greenland, +85o magnetic latitude) and Vostok (VOS, Antarctica, -83o magnetic latitude), respectively. The idea behind these indices is to estimate the intensity of anti-sunward plasma convection in the polar caps. This convection is associated with electric Hall currents and consequent magnetic field variations perpendicular to the antisunward plasma flow (and related Hall current) which can be monitored at the Qaanaaq and Vostok magnetic observatories. PC aims at monitoring the energy input from solar wind to the magnetosphere (loading activity). The index is constructed in such a way that it has a linear relationship with the merging Electric Field at the magnetopause; consequently PC is given in units of mV/m as for the electric field. In August 2013, the International Association of Geomagnetism and Aeronomy (IAGA) endorsed the PC index. The endorsed PC index is accessible at pcindex.org or through WDC Copenhagen.
The 1000 Genomes Project is an international collaboration to produce an extensive public catalog of human genetic variation, including SNPs and structural variants, and their haplotype contexts. This resource will support genome-wide association studies and other medical research studies. The genomes of about 2500 unidentified people from about 25 populations around the world will be sequenced using next-generation sequencing technologies. The results of the study will be freely and publicly accessible to researchers worldwide. The International Genome Sample Resource (IGSR) has been established at EMBL-EBI to continue supporting data generated by the 1000 Genomes Project, supplemented with new data and new analysis.