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The Genomic Observatories Meta-Database (GEOME) is a web-based database that captures the who, what, where, and when of biological samples and associated genetic sequences. GEOME helps users with the following goals: ensure the metadata from your biological samples is findable, accessible, interoperable, and reusable; improve the quality of your data and comply with global data standards; and integrate with R, ease publication to NCBI's sequence read archive, and work with an associated LIMS. The initial use case for GEOME came from the Diversity of the Indo-Pacific Network (DIPnet) resource.
<<<!!!<<< This repository is no longer available. >>>!!!>>> BioVeL is a virtual e-laboratory that supports research on biodiversity issues using large amounts of data from cross-disciplinary sources. BioVeL supports the development and use of workflows to process data. It offers the possibility to either use already made workflows or create own. BioVeL workflows are stored in MyExperiment - Biovel Group http://www.myexperiment.org/groups/643/content. They are underpinned by a range of analytical and data processing functions (generally provided as Web Services or R scripts) to support common biodiversity analysis tasks. You can find the Web Services catalogued in the BiodiversityCatalogue.
TemperateReefBase is a resource for temperate reef researchers worldwide to use and contribute data. Unique in its role as a one-stop-shop for global temperate reef data, TemperateReefBase was initially established by IMAS in collaboration with the Kelp Ecology Ecosystem Network (KEEN). KEEN was instigated through a National Centre for Ecological Analysis and Synthesis (NCEAS) working group which assembled experts from around the world to examine the impacts of global change on kelp-bed ecosystem worldwide. The group has assembled significant global data for kelps, other seaweeds and associated species including fishes, and has embarked on unprecedented global experiments and surveys in which identical experiments and surveys are being conducted at sites in kelp beds around the world to determine global trends and examine the capacity of kelps to respond to disturbance in the face of climate change and other anthropogenic stressors. The TemperateReefBase Data Portal is an online discovery interface showcasing temperate reef data collected from around the globe. The portal aims to make this data freely and openly available for the benefit of marine and environmental science as a whole. The TemperateReefBase Data Portal is hosted and maintained by the Institute for Marine and Antarctic Studies at the University of Tasmania, Australia.
The EarthChem Library is a data repository that archives, publishes and makes accessible data and other digital content from geoscience research (analytical data, data syntheses, models, technical reports, etc.)
Arca Data is Fiocruz's official repository for archiving, publishing, disseminating, preserving and sharing digital research data produced by the Fiocruz community or in partnership with other research institutes or bodies, with the aim of promoting new research, ensuring the reproducibility or replicability of existing research and promoting an Open and Citizen Science. Its objective is to stimulate the wide circulation of scientific knowledge, strengthening the institutional commitment to Open Science and free access to health information, in addition to providing transparency and fostering collaboration between researchers, educators, academics, managers and graduate students, to the advancement of knowledge and the creation of solutions that meet the demands of society.