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Found 114 result(s)

CIARD Ring

CIARDRING

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The CiardRING is a global directory of web-based information services and datasets for agricultural research for development (ARD). It is the principal tool created through the CIARD initiative to allow information providers to register their services and datasets in various categories and so facilitate the discovery of sources of agriculture-related information across the world. The RING aims to provide an infrastructure to improve the accessibility of the outputs of agricultural research and of information relevant to agriculture.

BioStudies

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The BioStudies database holds descriptions of biological studies, links to data from these studies in other databases at EMBL-EBI or outside, as well as data that do not fit in the structured archives at EMBL-EBI. The database accepts submissions via an online tool, or in a simple tab-delimited format. It also enables authors to submit supplementary information and link to it from the publication.

Open Forest Data

e-Puszcza

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Podlasie digital repository of natural science data

Lund University Humanities Lab Archive

LU Humanities Lab Archive

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As a member of SWE-CLARIN, the Humanities Lab will provide tools and expertise related to language archiving, corpus and (meta)data management, with a continued emphasis on multimodal corpora, many of which contain Swedish resources, but also other (often endangered) languages, multilingual or learner corpora. As a CLARIN K-centre we provide advice on multimodal and sensor-based methods, including EEG, eye-tracking, articulography, virtual reality, motion capture, av-recording. Current work targets automatic data retrieval from multimodal data sets, as well as the linking of measurement data (e.g. EEG, fMRI) or geo-demographic data (GIS, GPS) to language data (audio, video, text, annotations). We also provide assistance with speech and language technology related matters to various projects. A primary resource in the Lab is The Humanities Lab corpus server, containing a varied set of multimodal language corpora with standardised metadata and linked layers of annotations and other resources.

EBiSC catalogue

European Bank for induced pluripotent Stem Cells catalogue

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The EBiSC Catalogue is a collection of human iPS cells being made available to academic and commercial researchers for use in disease modelling and other forms of preclinical research. The initial collection has been generated from a wide range of donors representing specific disease backgrounds and healthy controls. As the collection grows, more isogenic control lines will become available which will add further to the collection’s appeal.

The European Database of Seismogenic Faults

EDSF

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The European Database of Seismogenic Faults (EDSF) was compiled in the framework of the EU Project SHARE, Work Package 3, Task 3.2. EDSF includes only faults that are deemed to be capable of generating earthquakes of magnitude equal to or larger than 5.5 and aims at ensuring a homogeneous input for use in ground-shaking hazard assessment in the Euro-Mediterranean area. Several research institutions participated in this effort with the contribution of many scientists (see the Database section for a full list). The EDSF database and website are hosted and maintained by INGV.

ARCHE

A Resource Centre for the HumanitiEs

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ARCHE (A Resource Centre for the HumanitiEs) is a service aimed at offering stable and persistent hosting as well as dissemination of digital research data and resources for the Austrian humanities community. ARCHE welcomes data from all humanities fields. ARCHE is the successor of the Language Resources Portal (LRP) and acts as Austria’s connection point to the European network of CLARIN Centres for language resources.

HUGO Gene Nomenclature Committee

HGNC

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The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.

climate4impact

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Climate4impact: a dedicated interface to ESGF for the climate impact community The portal Climate4impact, part of the ENES Data Infrastructure, provides access to data and quick looks of global and regional climate models and downscaled higher resolution climate data. The portal provides data transformation tooling and mapping & plotting capabilities, guidance, documentation, FAQ and examples. The Climate4Impact portal will be further developed during the IS-ENES3 project (2019-2023)and moved to a different environment. Meanwhile the portal at https://climate4impact.eu will remain available, but no new information or processing options will be included. When the new portal will become available this will be announced on https://is.enes.org/.

NanoCommons Knowledge Base

NanoSolveIT Knowledge Base

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The NanoTox Knowlege Base provides access to Nanomaterials, their physico-chemical characterisations, toxicological assays and environmental data as well as computational model based descriptors.

HyperLeda

Leda

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HyperLeda is an information system for astronomy: It consists in a database and tools to process that data according to the user's requirements. The scientific goal which motivates the development of HyperLeda is the study of the physics and evolution of galaxies. LEDA was created more than 20 years ago, in 1983, and became HyperLeda after the merging with Hypercat in 2000

RAVE database

Radial Velocity Experiment Database

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RAVE (RAdial Velocity Experiment) is a multi-fiber spectroscopic astronomical survey of stars in the Milky Way using the 1.2-m UK Schmidt Telescope of the Anglo-Australian Observatory (AAO). The RAVE collaboration consists of researchers from over 20 institutions around the world and is coordinated by the Leibniz-Institut für Astrophysik Potsdam. As a southern hemisphere survey covering 20,000 square degrees of the sky, RAVE's primary aim is to derive the radial velocity of stars from the observed spectra. Additional information is also derived such as effective temperature, surface gravity, metallicity, photometric parallax and elemental abundance data for the stars. The survey represents a giant leap forward in our understanding of our own Milky Way galaxy; with RAVE's vast stellar kinematic database the structure, formation and evolution of our Galaxy can be studied.

EMBL-EBI

European Molecular Biology Laboratory - European Bioinformatics Institute

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The European Bioinformatics Institute (EBI) has a long-standing mission to collect, organise and make available databases for biomolecular science. It makes available a collection of databases along with tools to search, download and analyse their content. These databases include DNA and protein sequences and structures, genome annotation, gene expression information, molecular interactions and pathways. Connected to these are linking and descriptive data resources such as protein motifs, ontologies and many others. In many of these efforts, the EBI is a European node in global data-sharing agreements involving, for example, the USA and Japan.

NMRshiftDB

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nmrshiftdb is a NMR database (web database) for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. Last not least, it features peer-reviewed submission of datasets by its users. The nmrshiftdb2 software is open source, the data is published under an open content license. Please consult the documentation for more detailed information. nmrshiftdb2 is the continuation of the NMRShiftDB project with additional data and bugfixes and changes in the software.

The Infrared Space Observatory data archive

ISO Data Archive

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The Infrared Space Observatory (ISO) is designed to provide detailed infrared properties of selected Galactic and extragalactic sources. The sensitivity of the telescopic system is about one thousand times superior to that of the Infrared Astronomical Satellite (IRAS), since the ISO telescope enables integration of infrared flux from a source for several hours. Density waves in the interstellar medium, its role in star formation, the giant planets, asteroids, and comets of the solar system are among the objects of investigation. ISO was operated as an observatory with the majority of its observing time being distributed to the general astronomical community. One of the consequences of this is that the data set is not homogeneous, as would be expected from a survey. The observational data underwent sophisticated data processing, including validation and accuracy analysis. In total, the ISO Data Archive contains about 30,000 standard observations, 120,000 parallel, serendipity and calibration observations and 17,000 engineering measurements. In addition to the observational data products, the archive also contains satellite data, documentation, data of historic aspects and externally derived products, for a total of more than 400 GBytes stored on magnetic disks. The ISO Data Archive is constantly being improved both in contents and functionality throughout the Active Archive Phase, ending in December 2006.

Endangered Languages Archive

ELAR

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The Endangered Languages Archive (ELAR) is a digital repository for preserving multimedia collections of endangered languages from all over the world, making them available for future generations. In ELAR’s collections you can find recordings of every-day conversations, instructions on how to build fish traps or boats, explanations of kinship systems and the use of medicinal plants, and learn about art forms like string figures and sand drawings. ELAR’s collections are unique records of local knowledge systems encoded in their languages, described by the holders of the knowledge themselves.

Solar and Heliospheric Observatory

SOHO

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SOHO, the Solar & Heliospheric Observatory, is a project of international collaboration between ESA and NASA to study the Sun from its deep core to the outer corona and the solar wind. SOHO was launched on December 2, 1995. The SOHO spacecraft was built in Europe by an industry team led by prime contractor Matra Marconi Space (now EADS Astrium) under overall management by ESA. The twelve instruments on board SOHO were provided by European and American scientists.

ForestPlots.net

FP

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ForestPlots.net is a web-accessible secure repository for forest plot inventories in South America, Africa and Asia. The database includes plot geographical information; location, taxonomic information and diameter measurements of trees inside each plot; and participants in plot establishment and re-measurement, including principal investigators, field assistants, students.

Copernicus

The European Earth Observation Pogramme

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Copernicus is a European system for monitoring the Earth. Copernicus consists of a complex set of systems which collect data from multiple sources: earth observation satellites and in situ sensors such as ground stations, airborne and sea-borne sensors. It processes these data and provides users with reliable and up-to-date information through a set of services related to environmental and security issues. The services address six thematic areas: land monitoring, marine monitoring, atmosphere monitoring, climate change, emergency management and security. The main users of Copernicus services are policymakers and public authorities who need the information to develop environmental legislation and policies or to take critical decisions in the event of an emergency, such as a natural disaster or a humanitarian crisis. Based on the Copernicus services and on the data collected through the Sentinels and the contributing missions , many value-added services can be tailored to specific public or commercial needs, resulting in new business opportunities. In fact, several economic studies have already demonstrated a huge potential for job creation, innovation and growth.

IMS Universität Stuttgart Repository

IMS Fedora Repository

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Currently, the IMS repository focuses on resources provided by the Institute for Natural Language Processing in Stuttgart (IMS) and other CLARIN-D related institutions such as the local Collaborative Research Centre 732 (SFB 732) as well as institutions and/or organizations that belong to the CLARIN-D extended scientific community. Comprehensive guidelines and workflows for submission by external contributors are being compiled based on the experiences in archiving such in-house resources.

Reactome

a curated pathway database

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Reactome is a manually curated, peer-reviewed pathway database, annotated by expert biologists and cross-referenced to bioinformatics databases. Its aim is to share information in the visual representations of biological pathways in a computationally accessible format. Pathway annotations are authored by expert biologists, in collaboration with Reactome editorial staff and cross-referenced to many bioinformatics databases. These include NCBI Gene, Ensembl and UniProt databases, the UCSC and HapMap Genome Browsers, the KEGG Compound and ChEBI small molecule databases, PubMed, and Gene Ontology.

Arctic Permafrost Geospatial Centre

APGC

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The Arctic Permafrost Geospatial Centre (APGC) is an Open Access Circum-Arctic Geospatial Data Portal that promotes, describes and visualizes geospatial permafrost data. A data catalogue and a WebGIS application allow to easily discover and view data and metadata. Data can be downloaded directly via link to the publishing data repository.

The Monarch Initiative

Monarch Initiative

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As with most biomedical databases, the first step is to identify relevant data from the research community. The Monarch Initiative is focused primarily on phenotype-related resources. We bring in data associated with those phenotypes so that our users can begin to make connections among other biological entities of interest. We import data from a variety of data sources. With many resources integrated into a single database, we can join across the various data sources to produce integrated views. We have started with the big players including ClinVar and OMIM, but are equally interested in boutique databases. You can learn more about the sources of data that populate our system from our data sources page https://monarchinitiative.org/about/sources.

Electron Microscopy Public Image Archive

EMPIAR

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EMPIAR, the Electron Microscopy Public Image Archive, is a public resource for raw, 2D electron microscopy images. Here, you can browse, upload, download and reprocess the thousands of raw, 2D images used to build a 3D structure. The purpose of EMPIAR is to provide an easy access to the state-of-the-art raw data to facilitate methods development and validation, which will lead to better 3D structures. It complements the Electron Microscopy Data Bank (EMDB), where 3D images are stored, and uses the fault-tolerant Aspera platform for data transfers

MGnify

formerly: EBI Metagenomics

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MGnify (formerly: EBI Metagenomics) offers an automated pipeline for the analysis and archiving of microbiome data to help determine the taxonomic diversity and functional & metabolic potential of environmental samples. Users can submit their own data for analysis or freely browse all of the analysed public datasets held within the repository. In addition, users can request analysis of any appropriate dataset within the European Nucleotide Archive (ENA). User-submitted or ENA-derived datasets can also be assembled on request, prior to analysis.