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Found 33 result(s)

Reactome

a curated pathway database

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Reactome is a manually curated, peer-reviewed pathway database, annotated by expert biologists and cross-referenced to bioinformatics databases. Its aim is to share information in the visual representations of biological pathways in a computationally accessible format. Pathway annotations are authored by expert biologists, in collaboration with Reactome editorial staff and cross-referenced to many bioinformatics databases. These include NCBI Gene, Ensembl and UniProt databases, the UCSC and HapMap Genome Browsers, the KEGG Compound and ChEBI small molecule databases, PubMed, and Gene Ontology.

OAGR

Online Ancient Genome Repository

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<<<!!!<<< The repository OAGR is no longer available. >>>!!!>>>

Broad GDAC Firehose

Genome Data Analysis Center

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Born of the desire to systematize analyses from The Cancer Genome Atlas pilot and scale their execution to the dozens of remaining diseases to be studied, GDAC Firehose now sits atop terabytes of analysis-ready TCGA data and reliably executes thousands of pipelines per month. More information: https://broadinstitute.atlassian.net/wiki/spaces/GDAC/

Publicdata.eu

Europe's Public Data

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>>>!!!<<< 2018-08-17: The repository is no longer available >>>!!!<<< >>>!!!<<< publicdata.eu portal is superseded by European data portal https://www.re3data.org/repository/r3d100012199 >>>!!!<<<

OceanRep GEOMAR Repository

GEOMAR Helmholtz Centre for Ocean Research Kiel

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GEOMAR Helmholtz Centre for Ocean Research Kiel is one of the leading marine science institutions in Europe. GEOMAR investigates the chemical, physical, biological, and geological processes in the oceans, as well as their interactions with the seafloor and the atmosphere. OceanRep is an open access digital collection containing the research output of GEOMAR staff and students. Included are journal articles, conference papers, book chapters, theses and more, - with fulltext, if available. Research data are linked to the publications entries.

Human Mortality Database

HMD

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The Human Mortality Database (HMD) was created to provide detailed mortality and population data to researchers, students, journalists, policy analysts, and others interested in the history of human longevity. The Human Mortality Database (HMD) contains original calculations of death rates and life tables for national populations (countries or areas), as well as the input data used in constructing those tables. The input data consist of death counts from vital statistics, plus census counts, birth counts, and population estimates from various sources.

Geoscience Australia

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Geoscience Australia provides geosciences data on Australia's onshore and offshore natural resources discovery, sustainable energy opportunities, and potential impacts on population, economy and environment.

Brown Digital Repository

BDR

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The Brown Digital Repository (BDR) is a place to gather, index, store, preserve, and make available digital assets produced via the scholarly, instructional, research, and administrative activities at Brown.

UNITE

Unified system for the DNA based fungal species linked to the classification

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UNITE provides unified way how you delimit, identify, communicate and work with DNA based Species Hypotheses (SH).

National Data Repository

NDR - National Data Repository India

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National Data Repository (NDR) is a reliable and integrated data repository of Exploration and Production (E&P) data of Indian sedimentary basins. It offers a unique platform to all concerns of E&P with provisions for seamless access to reliable geo-scientific data for India. Streamlining all associated procedures, policies and workflows pertaining to data submission, data management, data retrieval for all concerned pertaining to government agencies, academia and research communities with restrictions. NDR is owned by the Government of India, hosted at Directorate General of Hydrocarbons (DGH), Ministry of Petroleum and Natural Gas (MoPNG). Objectively it operates with geological data, petrophysical data, natural gas, seismic data, well & log data, spatial data, Reservoir data, Gravity & Magnetic data. NDR maintains and preserve hydrocarbon exploration & production data in a standard and reusable manner, but can't made available to entitled users freely. One cannot get access independently.

Résif Seismological Data Portal

Réseau sismologique et géodésique francais

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The Résif-EPOS Seismic data repository hosts and distributes seismological data from permanent and temporary seismic networks operated all over the world by French research institutions and international partners, to support research on source processes and imaging of the Earth's interior at all scales. Résif-EPOS (French seismologic and geodetic network) is a French national equipment for the observation and understanding of the solid Earth.

depositar

研究資料寄存所

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depositar — taking the term from the Portuguese/Spanish verb for to deposit — is an online repository for research data. The site is built by the researchers for the researchers. You are free to deposit, discover, and reuse datasets on depositar for all your research purposes.

Polar Data Catalogue

PDC

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The Polar Data Catalogue is an online database of metadata and data that describes, indexes and provides access to diverse data sets generated by polar researchers. These records cover a wide range of disciplines from natural sciences and policy, to health, social sciences, and more.

Internet Archive

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The Internet Archive includes texts, audio, moving images, software, and archived web pages.

Climate Data Online

CDO

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Climate Data Online (CDO) provides free access to NCDC's archive of global historical weather and climate data in addition to station history information. These data include quality controlled daily, monthly, seasonal, and yearly measurements of temperature, precipitation, wind, and degree days as well as radar data and 30-year Climate Normals

ETH Data Archive

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ETH Data Archive is ETH Zurich's long-term preservation solution for digital information such as research data, digitised content, archival records, or images. It serves as the backbone of data curation and for most of its content, it is a “dark archive” without public access. In this capacity, the ETH Data Archive also archives the content of ETH Zurich’s Research Collection which is the primary repository for members of the university and the first point of contact for publication of data at ETH Zurich. All data that was produced in the context of research at the ETH Zurich, can be published and archived in the Research Collection. An automated connection to the ETH Data Archive in the background ensures the medium to long-term preservation of all publications and research data. Direct access to the ETH Data Archive is intended only for customers who need to deposit software source code within the framework of ETH transfer Software Registration. Open Source code packages and other content from legacy workflows can be accessed via ETH Library @ swisscovery (https://library.ethz.ch/en/).

Protein Circular Dichroism Data Bank

PCDDB

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The Protein Circular Dichroism Data Bank (PCDDB) provides and accepts a circular dichroism spectra data. The PCDDB and it's parent organization, the Institute of Structural and Molecular Biology (ISMB), investigate molecular structure using techniques such as biomolecular nuclear magnetic resonance, X-ray crystallography and computational structure prediction, as methods for protein production and biological characterization.

OpenNeuro

formerly: OpenfMRI

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The OpenNeuro project (formerly known as the OpenfMRI project) was established in 2010 to provide a resource for researchers interested in making their neuroimaging data openly available to the research community. It is managed by Russ Poldrack and Chris Gorgolewski of the Center for Reproducible Neuroscience at Stanford University. The project has been developed with funding from the National Science Foundation, National Institute of Drug Abuse, and the Laura and John Arnold Foundation.

Million Song Dataset

MSD

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The Million Song Dataset is a freely-available collection of audio features and metadata for a million contemporary popular music tracks. The core of the dataset is the feature analysis and metadata for one million songs, provided by The Echo Nest. The dataset does not include any audio, only the derived features. Note, however, that sample audio can be fetched from services like 7digital, using code we provide.

MindBigData

The "MNIST" of Brain Digits

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The version 1.0 of the open database contains 1,151,268 brain signals of 2 seconds each, captured with the stimulus of seeing a digit (from 0 to 9) and thinking about it, over the course of almost 2 years between 2014 & 2015, from a single Test Subject David Vivancos. All the signals have been captured using commercial EEGs (not medical grade), NeuroSky MindWave, Emotiv EPOC, Interaxon Muse & Emotiv Insight, covering a total of 19 Brain (10/20) locations. In 2014 started capturing brain signals and released the first versions of the "MNIST" of brain digits, and in 2018 released another open dataset with a subset of the "IMAGENET" of The Brain. Version 0.05 (last update 09/28/2021) of the open database contains 24,000 brain signals of 2 seconds each, captured with the stimulus of seeing a real MNIST digit (from 0 to 9) 6,000 so far and thinking about it, + the same amout of signals with another 2 seconds of seeing a black screen, shown in between the digits, from a single Test Subject David Vivancos in a controlled still experiment to reduce noise from EMG & avoiding blinks.

CERN Open Data

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The CERN Open Data portal is the access point to a growing range of data produced through the research performed at CERN. It disseminates the preserved output from various research activities, including accompanying software and documentation which is needed to understand and analyze the data being shared.

OpenStreetMap

Planet.osm

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OpenStreetMap (https://www.openstreetmap.org/export#map=6/51.324/10.426) is built by a community of mappers that contribute and maintain data about roads, trails, cafés, railway stations, and much more, all over the world. Planet.osm is the OpenStreetMap data in one file.

Laboratory of Neuroimaging Image & Data Archive

LONI Image & Data Archive

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LONI’s Image and Data Archive (IDA) is a secure data archiving system. The IDA uses a robust infrastructure to provide researchers with a flexible and simple interface for de-identifying, searching, retrieving, converting, and disseminating their biomedical data. With thousands of investigators across the globe and more than 21 million data downloads to data, the IDA guarantees reliability with a fault-tolerant network comprising multiple switches, routers, and Internet connections to prevent system failure.

UTM-CSIC Data Centre

Marine Technology Unit Data Centre

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The UTM Data Centre is responsible for managing spatial data acquired during oceanographic cruises on board CSIC research vessels (RV Sarmiento de Gamboa, RV García del Cid) and RV Hespérides. The aim is, on the one hand, to disseminate which data exist and where, how and when they have been acquired. And on the other hand, to provide access to as much of the interoperable data as possible, following the FAIR principles, so that they can be used and reused. For this purpose, the UTM has a Spatial Data Infrastructure at a national level that consists of several services: Oceanographic Cruise and Data Catalogue Including metadata from more than 600 cruises carried out since 1991, with links to documentation associated to the cruise, navigation maps and datasets Geoportal Geospatial data mapping interface Underway Plot & QC Visualization, Quality Control and conversion to standard format of meteorological data and temperature and salinity of surface water At an international level, the UTM is a National Oceanographic Data Centre (NODC) of the Distributed European Marine Data Infrastructure SeaDataNet, to which the UTM provides metadata published in the Cruise Summary Report Catalog and in the data catalog Common Data Index Catalog, as well as public data to be shared.

Comparative Political Data Set

CPDS

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The Comparative Political Data Set 1960-2018 (CPDS) is a collection of political and institutional data which have been assembled in the context of the research projects “Die Handlungsspielräume des Nationalstaates” and “Critical junctures. An international comparison” directed by Klaus Armingeon and funded by the Swiss National Science Foundation. This data set consists of (mostly) annual data for 36 democratic OECD and/or EU-member coun-tries for the period of 1960 to 2018. In all countries, political data were collected only for the democratic periods. The data set is suited for cross-national, longitudinal and pooled time-series analyses.