Filter
Subjects
Content Types
Countries
AID systems
API
Certificates
Data access
Data access restrictions
Database access
Database access restrictions
Database licenses
Data licenses
Data upload
Data upload restrictions
Enhanced publication
Institution responsibility type
Institution type
Keywords
Metadata standards
PID systems
Provider types
Quality management
Repository languages
Software
Syndications
Repository types
Versioning
-
*at the end of a keyword allows wildcard searches -
"quotes can be used for searching phrases -
+represents an AND search (default) -
|represents an OR search -
-represents a NOT operation -
(and)implies priority -
~Nafter a word specifies the desired edit distance (fuzziness) -
~Nafter a phrase specifies the desired slop amount
- ← Previous
- 1 (current)
- Next →
Found 19 result(s)
Subject(s)
Content type(s)
Country
PLMD (Protein Lysine Modifications Database) is an online data resource specifically designed for protein lysine modifications (PLMs). The PLMD 3.0 database was extended and adapted from CPLA 1.0 (Compendium of Protein Lysine Acetylation) database and CPLM 2.0 (Compendium of Protein Lysine Modifications) database
Subject(s)
Content type(s)
Country
DEG hosts records of currently available essential genomic elements, such as protein-coding genes and non-coding RNAs, among bacteria, archaea and eukaryotes. Essential genes in a bacterium constitute a minimal genome, forming a set of functional modules, which play key roles in the emerging field, synthetic biology.
Content type(s)
Country
National Human Brain Bank for Development and Function was originally established in 2012 by the Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences as a public interest institution dedicated to the preservation and research of human brain tissues based on the volunteer donor station of Peking Union Medical College. In 2019, it was officially recognised by the Ministry of Science and Technology as a national science and technology resource platform: National Human Brain Bank for Development and Function.
Since its establishment, the Concordia Brain Bank has accepted and preserved more than two hundred and seventy whole brain tissue samples. While conducting its own research on the standardisation of brain banks, neuropathology and various histologies related to human brain ageing and dementia, it has also developed and published the Standardised Operational Protocol for Human Brain Tissue Banks in China for more than ten universities in China, and has provided valuable human brain tissue samples for a number of research groups in our own institutions and other units in China, which has strongly supported brain science and brain disease research in China.
As a national resource platform, we will continue to aim to support and lead brain science research in China and make positive contributions to maintaining brain health and defeating brain diseases.
Subject(s)
Content type(s)
Country
CERN, DESY, Fermilab and SLAC have built the next-generation High Energy Physics (HEP) information system, INSPIRE. It combines the successful SPIRES database content, curated at DESY, Fermilab and SLAC, with the Invenio digital library technology developed at CERN. INSPIRE is run by a collaboration of CERN, DESY, Fermilab, IHEP, IN2P3 and SLAC, and interacts closely with HEP publishers, arXiv.org, NASA-ADS, PDG, HEPDATA and other information resources.
INSPIRE represents a natural evolution of scholarly communication, built on successful community-based information systems, and provides a vision for information management in other fields of science.
Content type(s)
Country
This Animal Quantitative Trait Loci (QTL) database (Animal QTLdb) is designed to house all publicly available QTL and trait mapping data (i.e. trait and genome location association data; collectively called "QTL data" on this site) on livestock animal species for easily locating and making comparisons within and between species. New database tools are continuely added to align the QTL and association data to other types of genome information, such as annotated genes, RH / SNP markers, and human genome maps. Besides the QTL data from species listed below, the QTLdb is open to house QTL/association date from other animal species where feasible. Note that the JAS along with other journals, now require that new QTL/association data be entered into a QTL database as part of their publication requirements.
Subject(s)
Content type(s)
Country
The IMPC is a confederation of international mouse phenotyping projects working towards the agreed goals of the consortium: To undertake the phenotyping of 20,000 mouse mutants over a ten year period, providing the first functional annotation of a mammalian genome. Maintain and expand a world-wide consortium of institutions with capacity and expertise to produce germ line transmission of targeted knockout mutations in embryonic stem cells for 20,000 known and predicted mouse genes.
Test each mutant mouse line through a broad based primary phenotyping pipeline in all the major adult organ systems and most areas of major human disease.
Through this activity and employing data annotation tools, systematically aim to discover and ascribe biological function to each gene, driving new ideas and underpinning future research into biological systems;
Maintain and expand collaborative “networks” with specialist phenotyping consortia or laboratories, providing standardized secondary level phenotyping that enriches the primary dataset, and end-user, project specific tertiary level phenotyping that adds value to the mammalian gene functional annotation and fosters hypothesis driven research; and
Provide a centralized data centre and portal for free, unrestricted access to primary and secondary data by the scientific community, promoting sharing of data, genotype-phenotype annotation, standard operating protocols, and the development of open source data analysis tools.
Members of the IMPC may include research centers, funding organizations and corporations.
Subject(s)
Content type(s)
Country
Chinese Astronomical Data Center (CAsDC) is the scientific data service and infrastructure of National Astronomical Observatories, Chinese Academy of Sciences (NAOC), which is a key service from the China-VO. We are aiming to meet user requirements for astronomical research and education.
The CAsDC is based on World Data Center (WDC) for Astronomy, which is hosted at NAOC and has been providing data services to users since its initiation in 1980s. In 2012, the CAsDC became a regular member of the new created World Data System.
Subject(s)
Content type(s)
Country
iDog, an integrated resource for domestic dog (Canis lupus familiaris) and wild canids, provides the worldwide dog research community a variety of data services. This includes Genes, Genomes, SNPs, Breed/Disease Traits, Gene Expressions, Single Cell, Dog-Human Homolog Diseases and Literatures. In addition, iDog provides Online tools for performing genomic data visualization and analyses.
Subject(s)
Content type(s)
Country
The National Human Brain Tissue Bank for Health and Disease (the Brain Bank) was built to meet the needs of scientific research by integrating experts and forces from neuroscience, human anatomy, pathology and other related disciplines. The Brain Bank collects and stores post-mortem brain tissue donated by patients with various neuropsychiatric disorders and normal controls, as well as their life histories, in accordance with international standards, and provides a detailed and accurate neuropathological diagnosis of these brain tissue samples (also known as the "final diagnosis"). The aim is to discover and elucidate the causes of human neuropsychiatric diseases such as Alzheimer's disease, Parkinson's disease, depression, schizophrenia and other human diseases, and to provide scientists with the most direct and effective means of finding the relevant pathogenesis and establishing effective treatments. The National Brain Tissue Resource for Health and Disease The goal of the National Human Brain Tissue Repository for Health and Disease is to integrate collection, diagnosis, storage and utilisation, and to build a first-class human resource preservation infrastructure in China that is in line with international standards and provides support for neuroscience research. In 2020, the National Brain Bank has established three branches of the National Brain Bank in Hefei, Anhui, Nanjing, Jiangsu, and Shanghai. major cities.
Subject(s)
Content type(s)
Country
MTD is focused on mammalian transcriptomes with a current version that contains data from humans, mice, rats and pigs. Regarding the core features, the MTD browses genes based on their neighboring genomic coordinates or joint KEGG pathway and provides expression information on exons, transcripts, and genes by integrating them into a genome browser. We developed a novel nomenclature for each transcript that considers its genomic position and transcriptional features.
Content type(s)
Country
The National High Energy Physics Science Data Center (NHEPSDC) is a repository for high-energy physics. In 2019, it was designated as a scientific data center at the national level by the Ministry of Science and Technology of China (MOST). NHEPSDC is constructed and operated by the Institute of High Energy Physics (IHEP) of the Chinese Academy of Sciences (CAS). NHEPSDC consists of a main data center in Beijing, a branch center in Guangdong-Hong Kong-Macao Greater Bay Area, and a branch center in Huairou District of Beijing. The mission of NHEPSDC is to provide the services of data collection, archiving, long-term preservation, access and sharing, software tools, and data analysis. The services of NHEPSDC are mainly for high-energy physics and related scientific research activities. The data collected can be roughly divided into the following two categories: one is the raw data from large scientific facilities, and the other is data generated from general scientific and technological projects (usually supported by government funding), hereafter referred to as generic data. More than 70 people work in NHEPSDC now, with 18 in high-energy physics, 17 in computer science, 15 in software engineering, 20 in data management and some other operation engineers. NHEPSDC is equipped with a hierarchical storage system, high-performance computing power, high bandwidth domestic and international network links, and a professional service support system. In the past three years, the average data increment is about 10 PB per year. By integrating data resources with the IT environment, a state-of-art data process platform is provided to users for scientific research, the volume of data accessed every year is more than 400 PB with more than 10 million visits.
Subject(s)
Country
<<<!!!<<< 2019-12-23: the repository is offline >>>!!!>>> Introduction of genome-scale metabolic network:
The completion of genome sequencing and subsequent functional annotation for a great number of species enables the reconstruction of genome-scale metabolic networks. These networks, together with in silico network analysis methods such as the constraint based methods (CBM) and graph theory methods, can provide us systems level understanding of cellular metabolism. Further more, they can be applied to many predictions of real biological application such as: gene essentiality analysis, drug target discovery and metabolic engineering
Content type(s)
Country
<<<!!!<<< This repository is no longer available. >>>!!!>>>
World Data System for Cold and Arid Regions(CARD) is a new scientific data sharing system which is established on the basis of the former World Data Center for Glaciology and Geocryology, Lanzhou and other data centers hosted by Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy of Sciences. World Data System for Cold and Arid Regions is one of the constituents of World Data System. The data sharing system's main goals are to collect, manage and store the scientific data of Cold and Arid Regions area in China and provide the services for the scientific research of Cold and Arid Regions.
Subject(s)
Country
China Meteorological Data Service Center, an upgraded system of the meteorological data sharing network, is an important component of the underlying national science and technology platform and a main portal application system of meteorological cloud. It is an authoritative and unified shared service platform for China Meteorological Administration to open its meteorological data resources to domestic and global users, and a data supporting platform for China to open its meteorological service market and promote the sharing and efficient application of meteorological information resources as a new meteorological service system.
The comprehensive meteorological database provide online and offline shared services, the existing data types including global upper-air sounding data, surface observations, ocean observations, numerical forecast products, agro-meteorological data of ground observation data encryption, aircraft soundings, numerical weather prediction analysis field data, GPS-Met, Storm 2 No, GOES-9 satellite data, soil moisture, aircraft reported sandstorm monitoring, TOVS, ATOVS, wind profilers, satellite detection information.
Subject(s)
Content type(s)
Country
China’s digital forestry information platform was constructed according to the criteria and index system of forest sustainable management. the relative social, economic, and politic data was considered and collected, the database represents not only the current forestry development, but also the social, politic, and economic situations.
Subject(s)
Content type(s)
Country
The WDC is concerned with the collection, management, distribution and utilization of data from Chinese provinces, autonomous regions and counties,including:
Resource data:management,distribution and utlilzation of land, water, climate, forest, grassland, minerals, energy, etc.
Environmental data:pollution,environmental quality, change, natural disasters,soli erosion, etc.
Biological resources:animals, plants,wildlife
Social economy:agriculture, industry, transport, commerce,infrastructure,etc.
Population and labor
Geographic background data on scales of 1:4M,1:1M, 1:(1/2)M, 1:2500, etc.
Subject(s)
Content type(s)
Country
As the third center for oceanography of the World Data Center following WDC-A of the United States and WDC-B of Russia, WDC-D for oceanography boasts long-term and stable sources of domestic marine basic data. The State Oceanic Administration now has long-term observations obtained from the fixed coastal ocean stations, offshore and oceanic research vessels, moored and drifting buoys. More and more marine data have been available from the Chinese-foreign marine cooperative surveys, analysis and measurement of laboratory samples, reception by the satellite ground station, aerial telemeter and remote sensing, the GOOS program and global ships of opportunity reports, etc; More marine data are being and will be obtained from the ongoing “863” program, one of the state key projects during the Ninth Five-year plan and the seasat No 1 which is scheduled to be launched next year. Through many years’ effort, the WDC-D for oceanography has established formal relationship of marine data exchange with over 130 marine institutions in more than 60 countries in the world and is maintaining a close relationship of data exchange with over 30 major national oceanographic data centers. The established China Oceanic Information Network has joined the international marine data exchange system via Internet. Through these channels, a large amount data have been acquired of through international exchange, which, plus the marine data collected at home for many years, has brought the WDC-D for Oceanography over 100 years’ global marine data with a total data amounting to more than 10 billion bytes. In the meantime, a vast amount of work has been done in the standardized and normalized processing and management of the data, and a series of national and professional standards have been formulated and implemented successively. Moreover, appropriate standards and norms are being formulated as required.
Country
WFCC-MIRCEN World Data Centre for Microorganisms (WDCM) provides a comprehensive directory of culture collections, databases on microbes and cell lines, and the gateway to biodiversity, molecular biology and genome projects.The WFCC is a Multidisciplinary Commission of the International Union of Biological Sciences (IUBS) and a Federation within the International Union of Microbiological Societies (IUMS). The WFCC is concerned with the collection, authentication, maintenance and distribution of cultures of microorganisms and cultured cells. Its aim is to promote and support the establishment of culture collections and related services, to provide liaison and set up an information network between the collections and their users, to organise workshops and conferences, publications and newsletters and work to ensure the long term perpetuation of important collections.
Subject(s)
Content type(s)
Country
Geoscientific Data & Discovery Publishing Center (GDD) is based on the geological scientific data generated globally, establishing policies and systems for the scientific data publishing, absorbing the concepts and methods of international open data, and joint Digital Object Unique Identifier-DOI registration agencies to provide standard data reference formats and permanent access address for data references, doing publishing through the Internet platform, which combines innovation and advance.
GDD mainly includes data descriptor and entity data publishing. The data papers describe entity data and corresponding metadata information. The entity data includes common shared data such as geographic information, geologic maps, and databases, and also includes multiple data types, such as documents, archive records, data forms and other multimedia formed during geological work, various data-centric applications, database interface services, and typical data services.
- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
-
To the extent possible under law,
re3data.org
has waived all copyright and related or neighboring rights to
the database entries of re3data.org.
-
Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-04-19
