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Found 37 result(s)
The CancerData site is an effort of the Medical Informatics and Knowledge Engineering team (MIKE for short) of Maastro Clinic, Maastricht, The Netherlands. Our activities in the field of medical image analysis and data modelling are visible in a number of projects we are running. CancerData is offering several datasets. They are grouped in collections and can be public or private. You can search for public datasets in the NBIA (National Biomedical Imaging Archive) image archives without logging in.
Intrepid Bioinformatics serves as a community for genetic researchers and scientific programmers who need to achieve meaningful use of their genetic research data – but can’t spend tremendous amounts of time or money in the process. The Intrepid Bioinformatics system automates time consuming manual processes, shortens workflow, and eliminates the threat of lost data in a faster, cheaper, and better environment than existing solutions. The system also provides the functionality and community features needed to analyze the large volumes of Next Generation Sequencing and Single Nucleotide Polymorphism data, which is generated for a wide range of purposes from disease tracking and animal breeding to medical diagnosis and treatment.
Online materials database (known as PAULING FILE project) with nearly 2 million entries: physical properties, crystal structures, phase diagrams, available via API, ready for modern data-intensive applications. The source of these entries are about 300,000 peer-reviewed publications in materials science, processed during the last 16 years by an international team of PhD editors. The results are presented online with a quick search interface. The basic access is provided for free.
Country
The Ningaloo Atlas was created in response to the need for more comprehensive and accessible information on environmental and socio-economic data on the greater Ningaloo region. As such, the Ningaloo Atlas is a web portal to not only access and share information, but to celebrate and promote the biodiversity, heritage, value, and way of life of the greater Ningaloo region.
Through the Microsoft eScience Project, the Berkeley Water Center is developing a Water Cyberinfrastructure prototype that can be used to investigate and eventually manage water resources. The Water Cyberinfrastructure is developing in close collaboration between IT, physical science, and California water agency leaders. The value of the Cyberinfrastructure prototype will be tested through relevant end-to-end demonstration focused on important California Basins. The study region(s) are chosen based on several criteria, including availability of the data, importance of the problem that can be tackled given the cyberinfrastructure to California, leveraging opportunity, and scientific importance of the problems to be addressed. The BWC is currently building partnerships with several water representatives, such as the USGS, Sonoma County Water Agency, the Monterey County Water Resource Agency, and the NOAA National Marine Fisheries Service. Our objective with the California Water projects is to first assemble only the most critical components needed to address relevant science questions, rather than to initially create fully developed problem solving environments or construct a grand scale solution.
Chempound is a new generation repository architecture based on RDF, semantic dictionaries and linked data. It has been developed to hold any type of chemical object expressible in CML and is exemplified by crystallographic experiments and computational chemistry calculations. In both examples, the repository can hold >50k entries which can be searched by SPARQL endpoints and pre-indexing of key fields. The Chempound architecture is general and adaptable to other fields of data-rich science.
Monash.figshare is Monash University’s institutional data repository. It allows researchers to store, manage and showcase their data while retaining control over access rights and re-use conditions. Monash.figshare offers the latest in cloud-based technology, ensures valuable research data is stored securely, and supports long-term citations with Digital Object Identifiers (DOIs).
The figshare service for the University of Sheffield allows researchers to store, share and publish research data. It helps the research data to be accessible by storing Metadata alongside datasets. Additionally, every uploaded item receives a Digital Object identifier (DOI), which allows the data to be citable and sustainable. If there are any ethical or copyright concerns about publishing a certain dataset, it is possible to publish the metadata associated with the dataset to help discoverability while sharing the data itself via a private channel through manual approval.
Content type(s)
The JCB DataViewer is an image hosting and presentation platform for original image datasets associated with articles published in The Journal of Cell Biology, a peer-reviewed journal from the Rockefeller University Press.
Catena, the Digital Archive of Historic Gardens and Landscapes, is a collection of historic and contemporary images, including plans, engravings, and photographs, intended to support research and teaching in the fields of garden history and landscape studies. Created through the collaborative efforts of landscape historians and institutions, the initial offering of images is focused on the Villas as a Landscape Type.
The Wolfram Data Repository is a public resource that hosts an expanding collection of computable datasets, curated and structured to be suitable for immediate use in computation, visualization, analysis and more. Building on the Wolfram Data Framework and the Wolfram Language, the Wolfram Data Repository provides a uniform system for storing data and making it immediately computable and useful. With datasets of many types and from many sources, the Wolfram Data Repository is built to be a global resource for public data and data-backed publication.
!!!>>> 2018-06-27: no longer available on the given websites !!!<<<<!!!THIN has created a medical research database of anonymised patient records from information entered by general practices in their ViSion systems. THIN will supply anonymised data (with the identities of patients and practices fully protected) to approved researchers for drug safety and epidemiological studies. Such research will be approved by the appropriate ethics/scientific committee. The anonymised patient data will be collected from the practice's Vision clinical system, with the help of In Practice Systems, on a regular basis without interruption to the running of the system. CSD Medical Research UK can supply non-interventional, anonymised, longitudinal patient data for UK, France, Italy, Germany, Spain, Belgium and Australia. Data for the USA will be available in the near future.
Socrata’s cloud-based solution allows government organizations to put their data online, make data-driven decisions, operate more efficiently, and share insights with citizens.
The Saccharomyces Genome Database (SGD) provides comprehensive integrated biological information for the budding yeast Saccharomyces cerevisiae along with search and analysis tools to explore these data, enabling the discovery of functional relationships between sequence and gene products in fungi and higher organisms.
Country
DIAS aims at collecting and storing earth observation data; analyzing such data in combination with socio-economic data, and converting data into information useful for crisis management with respect to global-scale environmental disasters, and other threats; and to make this information available within Japan and overseas.
Launchpad is a software collaboration platform that provides: Bug tracking, Code hosting using Bazaar, Code reviews Ubuntu package building and hosting, Translations, Mailing lists, Answer tracking and FAQs, Specification tracking. Launchpad can host your project’s source code using the Bazaar version control system
Additionally to the institutional repository, current St. Edward's faculty have the option of uploading their work directly to their own SEU accounts on stedwards.figshare.com. Projects created on Figshare will automatically be published on this website as well. For more information, please see documentation
The Google Code Archive contains the data found on the Google Code Project Hosting Service, which turned down in early 2016. This archive contains over 1.4 million projects, 1.5 million downloads, and 12.6 million issues. Google Project Hosting powers Project Hosting on Google Code and Eclipse Labs. Project Hosting on Google Code Eclipse Labs. It provides a fast, reliable, and easy open source hosting service with the following features: Instant project creation on any topic; Git, Mercurial and Subversion code hosting with 2 gigabyte of storage space and download hosting support with 2 gigabytes of storage space; Integrated source code browsing and code review tools to make it easy to view code, review contributions, and maintain a high quality code base; An issue tracker and project wiki that are simple, yet flexible and powerful, and can adapt to any development process; Starring and update streams that make it easy to keep track of projects and developers that you care about.
Provided by the University Libraries, KiltHub is the comprehensive institutional repository and research collaboration platform for research data and scholarly outputs produced by members of Carnegie Mellon University and their collaborators. KiltHub collects, preserves, and provides stable, long-term global open access to a wide range of research data and scholarly outputs created by faculty, staff, and student members of Carnegie Mellon University in the course of their research and teaching.
The FigShare service for University of Auckland, New Zealand was launched in January 2015 and allows researchers to store, share and publish research data. It helps the research data to be accessible by storing Metadata alongside datasets. Additionally, every uploaded item recieves a Digital Object identifier (DOI), which allows the data to be cited. If there are any ethical or copyright concerns about publishing a certain dataset, it is possible to publish the metadata associated with the dataset to help discoverability while sharing the data itself via a private channel through manual approval.
myExperiment is a collaborative environment where scientists can safely publish their workflows and in silico experiments, share them with groups and find those of others. Workflows, other digital objects and bundles (called Packs) can now be swapped, sorted and searched like photos and videos on the Web. Unlike Facebook or MySpace, myExperiment fully understands the needs of the researcher and makes it really easy for the next generation of scientists to contribute to a pool of scientific methods, build communities and form relationships — reducing time-to-experiment, sharing expertise and avoiding reinvention. myExperiment is now the largest public repository of scientific workflows.
GWAS Central (previously the Human Genome Variation database of Genotype-to-Phenotype information) is a database of summary level findings from genetic association studies, both large and small. We actively gather datasets from public domain projects, and encourage direct data submission from the community.