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<<<!!!<<< This repository is no longer available. >>>!!!>>> BioVeL is a virtual e-laboratory that supports research on biodiversity issues using large amounts of data from cross-disciplinary sources. BioVeL supports the development and use of workflows to process data. It offers the possibility to either use already made workflows or create own. BioVeL workflows are stored in MyExperiment - Biovel Group http://www.myexperiment.org/groups/643/content. They are underpinned by a range of analytical and data processing functions (generally provided as Web Services or R scripts) to support common biodiversity analysis tasks. You can find the Web Services catalogued in the BiodiversityCatalogue.
The FAIRDOMHub is built upon the SEEK software suite, which is an open source web platform for sharing scientific research assets, processes and outcomes. FAIRDOM (Web Site) will establish a support and service network for European Systems Biology. It will serve projects in standardizing, managing and disseminating data and models in a FAIR manner: Findable, Accessible, Interoperable and Reusable. FAIRDOM is an initiative to develop a community, and establish an internationally sustained Data and Model Management service to the European Systems Biology community. FAIRDOM is a joint action of ERA-Net EraSysAPP and European Research Infrastructure ISBE.
The focus of PolMine is on texts published by public institutions in Germany. Corpora of parliamentary protocols are at the heart of the project: Parliamentary proceedings are available for long stretches of time, cover a broad set of public policies and are in the public domain, making them a valuable text resource for political science. The project develops repositories of textual data in a sustainable fashion to suit the research needs of political science. Concerning data, the focus is on converting text issued by public institutions into a sustainable digital format (TEI/XML).
OpenML is an open ecosystem for machine learning. By organizing all resources and results online, research becomes more efficient, useful and fun. OpenML is a platform to share detailed experimental results with the community at large and organize them for future reuse. Moreover, it will be directly integrated in today’s most popular data mining tools (for now: R, KNIME, RapidMiner and WEKA). Such an easy and free exchange of experiments has tremendous potential to speed up machine learning research, to engender larger, more detailed studies and to offer accurate advice to practitioners. Finally, it will also be a valuable resource for education in machine learning and data mining.
ChEMBL is a database of bioactive drug-like small molecules, it contains 2-D structures, calculated properties (e.g. logP, Molecular Weight, Lipinski Parameters, etc.) and abstracted bioactivities (e.g. binding constants, pharmacology and ADMET data). The data is abstracted and curated from the primary scientific literature, and cover a significant fraction of the SAR and discovery of modern drugs We attempt to normalise the bioactivities into a uniform set of end-points and units where possible, and also to tag the links between a molecular target and a published assay with a set of varying confidence levels. Additional data on clinical progress of compounds is being integrated into ChEMBL at the current time.
LOVD portal provides LOVD software and access to a list of worldwide LOVD applications through Locus Specific Database list and List of Public LOVD installations. The LOVD installations that have indicated to be included in the global LOVD listing are included in the overall LOVD querying service, which is based on an API.