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Found 85 result(s)

Interologous Interaction Database

I2D

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I2D (Interologous Interaction Database) is an on-line database of known and predicted mammalian and eukaryotic protein-protein interactions. It has been built by mapping high-throughput (HTP) data between species. Thus, until experimentally verified, these interactions should be considered "predictions". It remains one of the most comprehensive sources of known and predicted eukaryotic PPI. I2D includes data for S. cerevisiae, C. elegans, D. melonogaster, R. norvegicus, M. musculus, and H. sapiens.

Social Science Japan Data Archive

SSJ Data Archive

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The Social Science Japan Data Archive (SSJDA) collects, maintains, and provides access to the academic community, a vast archive of social science data (quantitative data obtained from social surveys) for secondary analyses.

FANTOM

FANTOM DB

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FANTOM stands for 'Functional Annotation of the Mammalian Genome' and is the name of an international research consortium organized by the RIKEN Omics Science Center. The FANTOM5 project aims to build a full understanding of transcriptional regulation in a human system by generating transcriptional regulatory networks that define every human cell type.

GAWSIS

GAW Station Information System

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GAWSIS is being developed and maintained by the Federal Office of Meteorology and Climatology MeteoSwiss in collaboration with the WMO GAW Secretariat, the GAW World Data Centres and other GAW representatives to improve the management of information about the GAW network of ground-based stations. The application is presently hosted by the Swiss Laboratories for Materials Testing and Research Empa. GAWSIS provides the GAW community and other interested people with an up-to-date, searchable data base of site descriptions, measurements programs and data available, contact people, bibliographic references. Linked data collections are hosted at the World Data Centers of the WMO Global Atmosphere Watch.

ICOS Carbon Portal

Integrated Carbon Observation System

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ICOS Carbon Portal is the data portal of the Integrated Carbon Observation System. It provides observational data from the state of the carbon cycle in Europe and the world. The Carbon Portal is the data center of the ICOS infrastructure. ICOS will collect greenhouse gas concentration and fluxes observations from three separate networks, all these observations are carried out to support research to help us understand how the Earth’s greenhouse gas balance works, because there are still many and large uncertainties!

International Data Service Center of the Institute of Labor Economics

Internationales Datenservicezentrum des Forschungsinstituts zur Zukunft der Arbeit

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IDSC is IZA's organizational unit whose purpose is to serve the scientific and infrastructural computing needs of IZA and its affiliated communities. IDSC is dedicated to supporting all users of data from the novice researcher to the experienced data analyst. IDSC aims at becoming the place for economically minded technologists and technologically savvy economists looking for data support, data access support and data services about labor economics. IDSC is actively involved in organizing events (see our next Red Cube Seminar Talk) for data professionals, data analysts, and scientific data users and young researchers to discuss and share findings and to establish contacts for future cooperation. All data collected are accessible to the scientific community as scientific use files for scholarly analyses free of charge. The Data Repository is available at https://datasets.iza.org/

Nuclear Receptor Signaling Atlas

NURSA Hub

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>>> !!! the repository is offline !!! <<< More information see: https://dknet.org/about/NURSA_Archive All NURSA-biocurated transcriptomic datasets have been preserved for data mining in SPP through an enhanced and expanded version of Transcriptomine named Ominer. To access these datasets, dkNET provides users with the information of 527 transcriptomic datasets that contain data related to nuclear receptors and nuclear receptor coregulators in the NURSA Datasets table view and redirects users to the current SPP dataset page. Once users find the specific dataset of research interest, users can download the dataset by clicking DOI and then clicking the Download Dataset button at the Signaling Pathways Project webpage. See https://www.re3data.org/repository/r3d100013650

Reality Commons

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Cell phones have become an important platform for the understanding of social dynamics and influence, because of their pervasiveness, sensing capabilities, and computational power. Many applications have emerged in recent years in mobile health, mobile banking, location based services, media democracy, and social movements. With these new capabilities, we can potentially be able to identify exact points and times of infection for diseases, determine who most influences us to gain weight or become healthier, know exactly how information flows among employees and productivity emerges in our work spaces, and understand how rumors spread. In an attempt to address these challenges, we release several mobile data sets here in "Reality Commons" that contain the dynamics of several communities of about 100 people each. We invite researchers to propose and submit their own applications of the data to demonstrate the scientific and business values of these data sets, suggest how to meaningfully extend these experiments to larger populations, and develop the math that fits agent-based models or systems dynamics models to larger populations. These data sets were collected with tools developed in the MIT Human Dynamics Lab and are now available as open source projects or at cost.

GeneWeaver.org

The Ontological Discovery Environment

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GeneWeaver combines cross-species data and gene entity integration, scalable hierarchical analysis of user data with a community-built and curated data archive of gene sets and gene networks, and tools for data driven comparison of user-defined biological, behavioral and disease concepts. Gene Weaver allows users to integrate gene sets across species, tissue and experimental platform. It differs from conventional gene set over-representation analysis tools in that it allows users to evaluate intersections among all combinations of a collection of gene sets, including, but not limited to annotations to controlled vocabularies. There are numerous applications of this approach. Sets can be stored, shared and compared privately, among user defined groups of investigators, and across all users.

European-Mediterranean Seismological Centre

EMSC

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EMSC collects real time parametric data (source parmaters and phase pickings) provided by 65 seismological networks of the Euro-Med region. These data are provided to the EMSC either by email or via QWIDS (Quake Watch Information Distribution System, developped by ISTI). The collected data are automatically archived in a database, made available via an autoDRM, and displayed on the web site. The collected data are automatically merged to produce automatic locations which are sent to several seismological institutes in order to perform quick moment tensors determination.

European Union Open Data Portal

EU Open Data Portal

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The European Union Open Data Portal is the single point of access to a growing range of data from the institutions and other bodies of the European Union (EU). Data are free for you to use and reuse for commercial or non-commercial purposes. By providing easy and free access to data, the portal aims to promote their innovative use and unleash their economic potential. It also aims to help foster the transparency and the accountability of the institutions and other bodies of the EU. The EU Open Data Portal is managed by the Publications Office of the European Union. Implementation of the EU's open data policy is the responsibility of the Directorate-General for Communications Networks, Content and Technology of the European Commission.

GFZ Data Services

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GFZ Data Services is a repository for research data and scientific software across the Earth System Sciences, hosted at GFZ. The curated data are archived, persistently accessible and published with digital object identifier (DOI). They range from large dynamic datasets from global monitoring networks with real-time aquisition, to international services in geodesy and geophysics, to the full suite of small and highly heterogeneous datasets collected by individual researchers or small teams ("long-tail data"). In addition to the DOI registration and data archiving itself, GFZ Data Services team offers comprehensive consultation by domain scientists and IT specialists. Among others, GFZ Data Services is data publisher for the IAG Services ICGEM, IGETS and ISG (IAG = Int. Association for Geodesy; ICGEM = Int. Center for Global Earth Models; IGETS = Int. Geodynamics and Earth Tide Service; ISG = Int. Service for the Geoid), the World Stress Map, INTERMAGNET, GEOFON, the Geophysical Instrument Pool Potsdam GIPP, TERENO, EnMAP Flight Campaigns, the Potsdam Institute for Climate Impact Research PIK, the Specialised Information Service for Solid Earth Geosciences (FID GEO) and hosts the GFZ Catalogue for the International Generic Sample Number IGSN.

Database of Interacting Proteins

DIP

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The DIP database catalogs experimentally determined interactions between proteins. It combines information from a variety of sources to create a single, consistent set of protein-protein interactions. The data stored within the DIP database were curated, both, manually by expert curators and also automatically using computational approaches that utilize the the knowledge about the protein-protein interaction networks extracted from the most reliable, core subset of the DIP data. Please, check the reference page to find articles describing the DIP database in greater detail. The Database of Ligand-Receptor Partners (DLRP) is a subset of DIP (Database of Interacting Proteins). The DLRP is a database of protein ligand and protein receptor pairs that are known to interact with each other. By interact we mean that the ligand and receptor are members of a ligand-receptor complex and, unless otherwise noted, transduce a signal. In some instances the ligand and/or receptor may form a heterocomplex with other ligands/receptors in order to be functional. We have entered the majority of interactions in DLRP as full DIP entries, with links to references and additional information

Center for Engineering Strong Motion Data

CESMD

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Strong-motion data of engineering and scientific importance from the United States and other seismically active countries are served through the Center for Engineering Strong Motion Data(CESMD). The CESMD now automatically posts strong-motion data from an increasing number of seismic stations in California within a few minutes following an earthquake as an InternetQuick Report(IQR). As appropriate,IQRs are updated by more comprehensive Internet Data Reports that include reviewed versions of the data and maps showing, for example, the finite fault rupture along with the distribution of recording stations. Automated processing of strong-motion data will be extended to post the strong-motion records of the regional seismic networks of the Advanced National Seismic System (ANSS) outside California.

IonomicHub

iHUB

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<<<!!!<<<This repository is no longer available>>>!!!>>>

Résif Seismological Data Portal

Réseau sismologique et géodésique francais

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The Résif-EPOS Seismic data repository hosts and distributes seismological data from permanent and temporary seismic networks operated all over the world by French research institutions and international partners, to support research on source processes and imaging of the Earth's interior at all scales. Résif-EPOS (French seismologic and geodetic network) is a French national equipment for the observation and understanding of the solid Earth.

Pandora

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Pandora is an open data platform devoted to the study of the human story. Data may be deposited from various disciplines and research topics that investigate humans from their early beginnings until present in addition to their environmental context (e.g. archeology, anthropology history, ancient DNA, isotopes, zooarchaeology, archaeobotany, and paleoenvironmental and paleoclimatic studies, etc.). Pandora allows autonomous data communities to self-manage their webspace and community membership. Data communities self-curate their data plus other supporting resources. Datasets may be assigned a new DOI and a schema markup is employed to improve data findability. Pandora also allows for links to datasets stored externally and having previously assigned DOIs. Through this, it becomes possible to establish data networks devoted to specific topics that may combine a mix of datasets stored either within Pandora or externally.

Molecular INTeraction Database

MINT

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Starting September 2013, MINT uses the IntAct database infrastructure to limit the duplication of efforts and to optimise future software development. Data manually curated by the MINT curators can now be accessed from the IntAct homepage at the EBI. Data maintenance and release, MINT PSICQUIC and IMEx services are under the responsibility of the IntAct team, while curation effort will be carried by both groups. The MINT development team now focuses on two new developments: mentha that integrates protein interaction information curated by IMEx databases and SIGNOR a database of logic relationships between human proteins. MINT is a public repository for molecular interactions reported in peer-reviewed journals.IT is a collection of molecular interaction databases that can be used to search for, analyze and graphically display molecular interaction networks and pathways from a wide variety of species. MINT is comprised of separate database components. HomoMINT, is an inferred human protein interatction database. Domino, is database of domain peptide interactions. A new component has been added called VirusMINT that explores the interactions of viral proteins with human proteins.

SABIO-RK

System for the Analysis of Biochemical Pathways - Reaction Kinetics

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The SABIO-RK is a web-based application based on the SABIO relational database that contains information about biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured. It aims to support modellers in the setting-up of models of biochemical networks, but it is also useful for experimentalists or researchers with interest in biochemical reactions and their kinetics. All the data are manually curated and annotated by biological experts, supported by automated consistency checks.

Flanders Marine Institute

VLIZ

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The Flanders Marine Institute (VLIZ) is a centre for marine and coastal research. As a partner in various projects and networks it promotes and supports the international image of Flemish marine scientific research and international marine education. In its capacity as a coordination and information platform, the Flanders Marine Institute (VLIZ) supports some thousand marine scientists in Flanders by disseminating their knowledge to policymakers, educators, the general public and scientists.

Incorporated Research Institutions for Seismology

IRIS

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IRIS offers free and open access to a comprehensive data store of raw geophysical time-series data collected from a large variety of sensors, courtesy of a vast array of US and International scientific networks, including seismometers (permanent and temporary), tilt and strain meters, infrasound, temperature, atmospheric pressure and gravimeters, to support basic research aimed at imaging the Earth's interior.

Service Centre of the Federal Government for Geo-Information and Geodesy - Open Data

Dienstleistungszentrum des Bundes für Geoinformation und Geodäsie

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The Service Centre of the Federal Government for Geo-Information and Geodesy (Dienstleistungszentrum des Bundes für Geoinformation und Geodäsie - DLZ) provides geodetic and geo-topographic reference data of the Federal Government centrally to federal institutions, public administrations, economy, science and citizens. The establishment of the Service Centre is based on the Federal Geographic Reference Data Act (Bundesgeoreferenzdatengesetz − BGeoRG), which came into effect on 1 November 2012. This act regulates use, quality and technology of the geodetic and geo-topographic reference systems, networks and data.

Survey Research Data Archive

SRDA

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The sources of the data sets include data sets donated by researchers, surveys carried out by SRDA, as well as by government department and other academic organizations. Prior to the release of data sets, the confidentiality and sensitivity of every survey data set are evaluated. Standard data management and cleaning procedures are applied to ensure data accuracy and completeness. In addition, metadata and relevant supplement files are also edited and attached.

domino

domaine peptide interactions

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<<<!!!<<< This repository is no longer available. 2019-02-19 >>>!!!>>>

World Data Center for Human Interactions in the Environments

WDC for Human Interactions in the Environment

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<<<!!!<<< duplicate >>>!!!>>> see https://www.re3data.org/repository/r3d100010159 This record is combined with 'NASA Socioeconomic Data and Applications Center' The World Data Center for Human Interactions in the Environment has been superseded by the NASA Socioeconomic Data and Applications Center (SEDAC), which is a regular member of the World Data System (WDS). The International Council for Science (ICSU) replaced the World Data Centers (WDC) with the WDS, which supports the provision of trusted scientific data services by certifying its members to ensure that they maintain the organizational capabilities and infrastructure for managing the data products and services that they offer. SEDAC focuses on human interactions in the environment and is one of the Distributed Active Archive Centers (DAACs) in the NASA Earth Observing System Data and Information System (EOSDIS). The NASA Earth Science Data and Information System (ESDIS) Project, a WDS Network Member, manages the EOSDIS science systems.